AT3G29020 (MYB110, AtMYB110)

Aliases : MYB110, AtMYB110

Description : myb domain protein 110

Gene families : OG0000080 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000080_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT3G29020
Cluster	HCCA: Cluster_16

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00001p00272410	AtMYB98, MYB98,...	RNA biosynthesis.transcriptional activation.MYB...	0.04	OrthoFinder output from all 47 species
AMTR_s00186p00015620	BW52, ATMYB52,...	RNA biosynthesis.transcriptional activation.MYB...	0.03	OrthoFinder output from all 47 species
AT1G26780	AtMYB117, LOF1, MYB117	myb domain protein 117	0.09	OrthoFinder output from all 47 species
AT1G43330	No alias	Homeodomain-like superfamily protein	0.02	OrthoFinder output from all 47 species
AT1G73410	MYB54, ATMYB54	myb domain protein 54	0.07	OrthoFinder output from all 47 species
AT3G50060	MYB77	myb domain protein 77	0.03	OrthoFinder output from all 47 species
AT4G33450	ATMYB69, MYB69	myb domain protein 69	0.04	OrthoFinder output from all 47 species
Adi_g109382	MYB77	MYB class-R2R3 subgroup-22/23 transcription factor &...	0.03	OrthoFinder output from all 47 species
Ala_g02622	MYB3R-1,...	R1R2R3-MYB transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ala_g03504	BW52, ATMYB52, MYB52	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ala_g27236	BW52, ATMYB52, MYB52	MYB class-R2R3 subgroup-21 transcription factor &...	0.06	OrthoFinder output from all 47 species
Als_g15721	LOF2, MYB105, ATMYB105	MYB class-R2R3 subgroup-21 transcription factor &...	0.05	OrthoFinder output from all 47 species
Als_g15763	MYB3R-1,...	R1R2R3-MYB transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Als_g27407	ATMYB3R5, MYB3R-5	R1R2R3-MYB transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Als_g47836	MYB3R-1,...	R1R2R3-MYB transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Als_g57490	MYB3R-3, AtMYB3R3	R1R2R3-MYB transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Aspi01Gene07164.t1	MYB3R-1,...	R1R2R3-MYB transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Aspi01Gene07170.t2	MYB3R-1,...	R1R2R3-MYB transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene69493.t1	LOF2, MYB105,...	MYB class-R2R3 subgroup-21 transcription factor &...	0.03	OrthoFinder output from all 47 species
Azfi_s0018.g014830	MYBR1, MYB44,...	MYB class-R2R3 subgroup-22/23 transcription factor &...	0.03	OrthoFinder output from all 47 species
Azfi_s0105.g044929	AtMYB117, LOF1, MYB117	MYB class-R2R3 subgroup-21 transcription factor &...	0.04	OrthoFinder output from all 47 species
Azfi_s0173.g055749	MYB3R-1,...	R1R2R3-MYB transcription factor & original description:...	0.02	OrthoFinder output from all 47 species
Azfi_s0243.g059882	AtMYB117, LOF1, MYB117	MYB class-R2R3 subgroup-21 transcription factor &...	0.03	OrthoFinder output from all 47 species
Azfi_s1025.g095454	ATMYB3R5, MYB3R-5	R1R2R3-MYB transcription factor & original description: CDS=1-468	0.03	OrthoFinder output from all 47 species
Ceric.03G075000.1	MYB56, AtMYB56,...	MYB class-R2R3 subgroup-21 transcription factor &...	0.03	OrthoFinder output from all 47 species
Ceric.19G007400.1	LOF2, MYB105,...	MYB class-R2R3 subgroup-21 transcription factor &...	0.05	OrthoFinder output from all 47 species
Ceric.30G050500.1	ATMYB119,...	MYB class-R2R3 transcription factor & original...	0.03	OrthoFinder output from all 47 species
Dac_g16265	AtMYB117, LOF1, MYB117	MYB class-R2R3 subgroup-21 transcription factor &...	0.02	OrthoFinder output from all 47 species
Dcu_g05466	LOF2, MYB105, ATMYB105	MYB class-R2R3 subgroup-21 transcription factor &...	0.02	OrthoFinder output from all 47 species
Dcu_g15923	MYB3R-1,...	R1R2R3-MYB transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Dde_g02900	MYB77	MYB class-R2R3 subgroup-22/23 transcription factor &...	0.03	OrthoFinder output from all 47 species
Dde_g24983	AtMYB124, MYB124, FLP	MYB class-R2R3 transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g09643	MYBR1, MYB44,...	MYB class-R2R3 subgroup-22/23 transcription factor &...	0.04	OrthoFinder output from all 47 species
Ehy_g10489	MYBR1, MYB44,...	MYB class-R2R3 subgroup-22/23 transcription factor &...	0.03	OrthoFinder output from all 47 species
Ehy_g12960	MYB77	MYB class-R2R3 subgroup-22/23 transcription factor &...	0.03	OrthoFinder output from all 47 species
Ehy_g24773	MYB77	MYB class-R2R3 subgroup-22/23 transcription factor &...	0.03	OrthoFinder output from all 47 species
Ehy_g24947	ATMYB3R5, MYB3R-5	not classified & original description: none	0.02	OrthoFinder output from all 47 species
GSVIVT01011436001	LOF2, MYB105, ATMYB105	RNA biosynthesis.transcriptional activation.MYB...	0.03	OrthoFinder output from all 47 species
GSVIVT01019967001	AtMYB117, LOF1, MYB117	RNA biosynthesis.transcriptional activation.MYB...	0.08	OrthoFinder output from all 47 species
GSVIVT01026481001	BW52, ATMYB52, MYB52	RNA biosynthesis.transcriptional activation.MYB...	0.03	OrthoFinder output from all 47 species
GSVIVT01029941001	LOF2, MYB105, ATMYB105	RNA biosynthesis.transcriptional activation.MYB...	0.03	OrthoFinder output from all 47 species
Gb_06298	AtMYB117, LOF1, MYB117	transcription factor (MYB)	0.04	OrthoFinder output from all 47 species
LOC_Os01g16810.1	LOF2, MYB105,...	transcription factor (MYB)	0.06	OrthoFinder output from all 47 species
LOC_Os01g63680.1	PGA37, ATMYB118,...	transcription factor (MYB)	0.03	OrthoFinder output from all 47 species
LOC_Os01g74590.1	MYBR1, MYB44,...	transcription factor (MYB)	0.03	OrthoFinder output from all 47 species
LOC_Os06g43090.1	MYBR1, MYB44,...	transcription factor (MYB)	0.05	OrthoFinder output from all 47 species
LOC_Os08g33800.1	LOF2, MYB105,...	transcription factor (MYB)	0.03	OrthoFinder output from all 47 species
LOC_Os11g10130.1	BW52, ATMYB52,...	transcription factor (MYB)	0.05	OrthoFinder output from all 47 species
Len_g10129	MYB56, AtMYB56	MYB class-R2R3 subgroup-21 transcription factor &...	0.03	OrthoFinder output from all 47 species
Lfl_g09604	AtMYB124, MYB124, FLP	MYB class-R2R3 transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Lfl_g25897	MYB77	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Lfl_g29787	MYBR1, MYB44,...	MYB class-R2R3 subgroup-22/23 transcription factor &...	0.02	OrthoFinder output from all 47 species
MA_120049g0010	MYBR1, MYB44,...	transcription factor (MYB)	0.02	OrthoFinder output from all 47 species
Mp1g08640.1	MYB3R-1,...	transcription factor (MYB)	0.02	OrthoFinder output from all 47 species
Mp5g14610.1	MYB77	transcription factor (MYB)	0.02	OrthoFinder output from all 47 species
Msp_g11561	MYB77	MYB class-R2R3 subgroup-22/23 transcription factor &...	0.03	OrthoFinder output from all 47 species
Nbi_g24734	LOF2, MYB105, ATMYB105	MYB class-R2R3 subgroup-21 transcription factor &...	0.03	OrthoFinder output from all 47 species
Ore_g22011	MYB73, ATMYB73	MYB class-R2R3 subgroup-22/23 transcription factor &...	0.03	OrthoFinder output from all 47 species
Ore_g45311	AtMYB3R4, MYB3R-4	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g45312	ATMYB3R5, MYB3R-5	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g65999	MYB73, ATMYB73	MYB class-R2R3 subgroup-22/23 transcription factor &...	0.03	OrthoFinder output from all 47 species
Pnu_g24702	MYB73, ATMYB73	MYB class-R2R3 subgroup-22/23 transcription factor &...	0.02	OrthoFinder output from all 47 species
Pnu_g27096	MYB88, AtMYB88	MYB class-R2R3 transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Pp3c17_19960V3.1	Pp3c17_19960	No annotation	0.02	OrthoFinder output from all 47 species
Ppi_g12324	LOF2, MYB105, ATMYB105	MYB class-R2R3 subgroup-21 transcription factor &...	0.02	OrthoFinder output from all 47 species
Ppi_g12915	AtMYB124, MYB124, FLP	MYB class-R2R3 transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0096.g019382	MYB73, ATMYB73	MYB class-R2R3 subgroup-22/23 transcription factor &...	0.04	OrthoFinder output from all 47 species
Sacu_v1.1_s0226.g026344	MYB70, AtMYB70	MYB class-R2R3 subgroup-22/23 transcription factor &...	0.05	OrthoFinder output from all 47 species
Sam_g14793	No alias	MYB class-R2R3 subgroup-22/23 transcription factor &...	0.02	OrthoFinder output from all 47 species
Smo6091	AtMYB117, LOF1, MYB117	RNA biosynthesis.transcriptional activation.MYB...	0.02	OrthoFinder output from all 47 species
Solyc03g112890.1.1	AtMYB98, MYB98,...	transcription factor (MYB)	0.03	OrthoFinder output from all 47 species
Solyc04g079360.1.1	MYB77, Solyc04g079360	transcription factor (MYB)	0.04	OrthoFinder output from all 47 species
Solyc05g007870.3.1	LOF2, MYB105,...	transcription factor (MYB)	0.04	OrthoFinder output from all 47 species
Tin_g19510	MYBR1, MYB44,...	MYB class-R2R3 subgroup-22/23 transcription factor &...	0.02	OrthoFinder output from all 47 species
Tin_g24569	MYB73, ATMYB73	MYB class-R2R3 subgroup-22/23 transcription factor &...	0.02	OrthoFinder output from all 47 species
Tin_g28496	LOF2, MYB105, ATMYB105	MYB class-R2R3 subgroup-21 transcription factor &...	0.02	OrthoFinder output from all 47 species
Zm00001e005044_P002	ATMYB119,...	transcription factor (MYB)	0.04	OrthoFinder output from all 47 species
Zm00001e013910_P001	MYB77, Zm00001e013910	transcription factor (MYB)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	ISS	Interproscan
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	TAS	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0003002	regionalization	IEP	HCCA
BP	GO:0003006	developmental process involved in reproduction	IEP	HCCA
BP	GO:0007389	pattern specification process	IEP	HCCA
BP	GO:0008361	regulation of cell size	IEP	HCCA
BP	GO:0009566	fertilization	IEP	HCCA
BP	GO:0009567	double fertilization forming a zygote and endosperm	IEP	HCCA
BP	GO:0009608	response to symbiont	IEP	HCCA
BP	GO:0009610	response to symbiotic fungus	IEP	HCCA
BP	GO:0009908	flower development	IEP	HCCA
BP	GO:0010093	specification of floral organ identity	IEP	HCCA
BP	GO:0010160	formation of animal organ boundary	IEP	HCCA
CC	GO:0010169	thioglucosidase complex	IEP	HCCA
MF	GO:0010180	thioglucosidase binding	IEP	HCCA
BP	GO:0010500	transmitting tissue development	IEP	HCCA
BP	GO:0022414	reproductive process	IEP	HCCA
BP	GO:0031537	regulation of anthocyanin metabolic process	IEP	HCCA
BP	GO:0031540	regulation of anthocyanin biosynthetic process	IEP	HCCA
BP	GO:0032501	multicellular organismal process	IEP	HCCA
BP	GO:0032502	developmental process	IEP	HCCA
BP	GO:0044403	biological process involved in symbiotic interaction	IEP	HCCA
BP	GO:0048367	shoot system development	IEP	HCCA
BP	GO:0048437	floral organ development	IEP	HCCA
BP	GO:0048438	floral whorl development	IEP	HCCA
BP	GO:0048440	carpel development	IEP	HCCA
BP	GO:0048444	floral organ morphogenesis	IEP	HCCA
BP	GO:0048446	petal morphogenesis	IEP	HCCA
BP	GO:0048462	carpel formation	IEP	HCCA
BP	GO:0048467	gynoecium development	IEP	HCCA
BP	GO:0048507	meristem development	IEP	HCCA
BP	GO:0048608	reproductive structure development	IEP	HCCA
BP	GO:0048646	anatomical structure formation involved in morphogenesis	IEP	HCCA
BP	GO:0048731	system development	IEP	HCCA
BP	GO:0048827	phyllome development	IEP	HCCA
BP	GO:0048856	anatomical structure development	IEP	HCCA
BP	GO:0048859	formation of anatomical boundary	IEP	HCCA
BP	GO:0090567	reproductive shoot system development	IEP	HCCA
BP	GO:0090698	post-embryonic plant morphogenesis	IEP	HCCA
BP	GO:0090701	specification of plant organ identity	IEP	HCCA
BP	GO:0099402	plant organ development	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001005	SANT/Myb	117	161
IPR001005	SANT/Myb	65	110

External Links

No external refs found!

AT3G29020 (MYB110, AtMYB110)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation