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AT3G28570


Description : P-loop containing nucleoside triphosphate hydrolases superfamily protein


Gene families : OG0000163 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000163_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G28570

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00024p00191310 evm_27.TU.AmTr_v1... AAA-ATPase At4g30250 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AT5G17760 No alias P-loop containing nucleoside triphosphate hydrolases... 0.05 OrthoFinder output from all 47 species
Adi_g088333 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06267 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g52993 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.06G084000.1 Ceric.06G084000 not classified & original description: pacid=50619247... 0.03 OrthoFinder output from all 47 species
Dcu_g06996 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01010371001 BCS1 AAA-ATPase At5g17760 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01032553001 No alias AAA-ATPase At3g28580 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
LOC_Os06g48240.1 LOC_Os06g48240 AAA-ATPase At3g28580 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os07g33380.1 LOC_Os07g33380 AAA-ATPase At5g17760 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
MA_10435468g0010 No alias AAA-ATPase At3g28510 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Msp_g03762 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g11172 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e034224_P001 Zm00001e034224 AAA-ATPase At4g25835 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding ISS Interproscan
CC GO:0005886 plasma membrane ISM Interproscan
MF GO:0016887 ATP hydrolysis activity ISS Interproscan
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Type GO Term Name Evidence Source
BP GO:0003002 regionalization IEP HCCA
BP GO:0003006 developmental process involved in reproduction IEP HCCA
BP GO:0007389 pattern specification process IEP HCCA
BP GO:0009888 tissue development IEP HCCA
BP GO:0010051 xylem and phloem pattern formation IEP HCCA
BP GO:0010087 phloem or xylem histogenesis IEP HCCA
BP GO:0010305 leaf vascular tissue pattern formation IEP HCCA
BP GO:0010588 cotyledon vascular tissue pattern formation IEP HCCA
BP GO:0022414 reproductive process IEP HCCA
BP GO:0032502 developmental process IEP HCCA
BP GO:0048364 root development IEP HCCA
BP GO:0048367 shoot system development IEP HCCA
BP GO:0048449 floral organ formation IEP HCCA
BP GO:0048451 petal formation IEP HCCA
BP GO:0048453 sepal formation IEP HCCA
BP GO:0048646 anatomical structure formation involved in morphogenesis IEP HCCA
BP GO:0048731 system development IEP HCCA
BP GO:1905393 plant organ formation IEP HCCA
InterPro domains Description Start Stop
IPR025753 AAA_N_dom 27 128
IPR003959 ATPase_AAA_core 240 372
No external refs found!