1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. AT3G27490

AT3G27490


Description : Cysteine/Histidine-rich C1 domain family protein


Gene families : OG0004669 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004669_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G27490
Cluster HCCA: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
AT1G69150 No alias Cysteine/Histidine-rich C1 domain family protein 0.05 OrthoFinder output from all 47 species
AT2G04680 No alias Cysteine/Histidine-rich C1 domain family protein 0.09 OrthoFinder output from all 47 species
AT4G01925 No alias Cysteine/Histidine-rich C1 domain family protein 0.03 OrthoFinder output from all 47 species
AT4G02190 No alias Cysteine/Histidine-rich C1 domain family protein 0.07 OrthoFinder output from all 47 species
AT4G13992 No alias Cysteine/Histidine-rich C1 domain family protein 0.05 OrthoFinder output from all 47 species
AT4G16015 No alias Cysteine/Histidine-rich C1 domain family protein 0.04 OrthoFinder output from all 47 species
AT5G26190 No alias Cysteine/Histidine-rich C1 domain family protein 0.05 OrthoFinder output from all 47 species
AT5G29624 No alias Cysteine/Histidine-rich C1 domain family protein 0.02 OrthoFinder output from all 47 species
AT5G39471 No alias Cysteine/Histidine-rich C1 domain family protein 0.05 OrthoFinder output from all 47 species
AT5G42840 No alias Cysteine/Histidine-rich C1 domain family protein 0.04 OrthoFinder output from all 47 species
AT5G54040 No alias Cysteine/Histidine-rich C1 domain family protein 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
MF GO:0005275 amine transmembrane transporter activity IEP HCCA
MF GO:0005342 organic acid transmembrane transporter activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
BP GO:0009914 hormone transport IEP HCCA
BP GO:0009926 auxin polar transport IEP HCCA
BP GO:0010315 auxin export across the plasma membrane IEP HCCA
BP GO:0010540 basipetal auxin transport IEP HCCA
BP GO:0010541 acropetal auxin transport IEP HCCA
BP GO:0010928 regulation of auxin mediated signaling pathway IEP HCCA
MF GO:0015171 amino acid transmembrane transporter activity IEP HCCA
MF GO:0046943 carboxylic acid transmembrane transporter activity IEP HCCA
BP GO:0048440 carpel development IEP HCCA
BP GO:0060918 auxin transport IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
BP GO:0140115 export across plasma membrane IEP HCCA
BP GO:0140352 export from cell IEP HCCA
InterPro domains Description Start Stop
IPR004146 DC1 69 117
IPR004146 DC1 297 344
IPR004146 DC1 14 57
IPR004146 DC1 380 427
IPR004146 DC1 182 230
IPR004146 DC1 244 287
IPR004146 DC1 543 591
No external refs found!