1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. AT3G27340

AT3G27340


Description : FUNCTIONS IN: molecular_function unknown; INVOLVED IN: oxidation reduction; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Gamma-butyrobetaine dioxygenase/Trimethyllysine dioxygenase, N-terminal (InterPro:IPR010376); Has 1035 Blast hits to 1035 proteins in 399 species: Archae - 0; Bacteria - 765; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 231 (source: NCBI BLink).


Gene families : OG0008616 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008616_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G27340
Cluster HCCA: Cluster_120

Target Alias Description ECC score Gene Family Method Actions
Azfi_s0050.g031040 No alias not classified & original description: CDS=260-481 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005739 mitochondrion ISM Interproscan
CC GO:0009507 chloroplast ISM Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0005996 monosaccharide metabolic process IEP HCCA
BP GO:0019321 pentose metabolic process IEP HCCA
BP GO:0042732 D-xylose metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR010376 GBBH-like_N 32 109
No external refs found!