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  5. AT3G24870

AT3G24870


Description : Helicase/SANT-associated, DNA binding protein


Gene families : OG0001880 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001880_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G24870
Cluster HCCA: Cluster_51

Target Alias Description ECC score Gene Family Method Actions
Adi_g107358 No alias component *(EAF1) of NuA4 histone acetyltransferase... 0.06 OrthoFinder output from all 47 species
Adi_g112779 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g20989 No alias component *(EAF1) of NuA4 histone acetyltransferase... 0.05 OrthoFinder output from all 47 species
Aop_g08156 No alias component *(EAF1) of NuA4 histone acetyltransferase... 0.02 OrthoFinder output from all 47 species
Azfi_s0006.g009719 No alias component *(EAF1) of NuA4 histone acetyltransferase... 0.06 OrthoFinder output from all 47 species
Cba_g32209 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.1Z107100.1 Ceric.1Z107100 component *(EAF1) of NuA4 histone acetyltransferase... 0.06 OrthoFinder output from all 47 species
Dcu_g44993 No alias component *(EAF1) of NuA4 histone acetyltransferase... 0.09 OrthoFinder output from all 47 species
GSVIVT01028685001 No alias Chromatin modification-related protein EAF1 A... 0.07 OrthoFinder output from all 47 species
Gb_03424 No alias component EAF1 of NuA4 histone acetyltransferase complex 0.07 OrthoFinder output from all 47 species
Gb_31226 No alias component EAF1 of NuA4 histone acetyltransferase complex 0.07 OrthoFinder output from all 47 species
LOC_Os05g51550.1 LOC_Os05g51550 Chromatin modification-related protein EAF1 B... 0.03 OrthoFinder output from all 47 species
LOC_Os08g08000.1 LOC_Os08g08000 component EAF1 of NuA4 histone acetyltransferase complex 0.08 OrthoFinder output from all 47 species
Len_g14156 No alias component *(EAF1) of NuA4 histone acetyltransferase... 0.04 OrthoFinder output from all 47 species
MA_16444g0030 No alias component EAF1 of NuA4 histone acetyltransferase complex 0.03 OrthoFinder output from all 47 species
MA_31176g0010 No alias component EAF1 of NuA4 histone acetyltransferase complex 0.04 OrthoFinder output from all 47 species
Mp2g02900.1 No alias component EAF1 of NuA4 histone acetyltransferase complex 0.04 OrthoFinder output from all 47 species
Ore_g18801 No alias component *(EAF1) of NuA4 histone acetyltransferase... 0.05 OrthoFinder output from all 47 species
Pir_g12255 No alias component *(EAF1) of NuA4 histone acetyltransferase... 0.02 OrthoFinder output from all 47 species
Pp3c26_13463V3.1 Pp3c26_13463 Helicase/SANT-associated, DNA binding protein 0.01 OrthoFinder output from all 47 species
Pp3c4_31630V3.1 Pp3c4_31630 Helicase/SANT-associated, DNA binding protein 0.01 OrthoFinder output from all 47 species
Ppi_g42118 No alias component *(EAF1) of NuA4 histone acetyltransferase... 0.03 OrthoFinder output from all 47 species
Sam_g36096 No alias component *(EAF1) of NuA4 histone acetyltransferase... 0.07 OrthoFinder output from all 47 species
Smo424802 No alias Chromatin modification-related protein EAF1 B... 0.06 OrthoFinder output from all 47 species
Solyc06g083420.3.1 Solyc06g083420 component EAF1 of NuA4 histone acetyltransferase complex 0.05 OrthoFinder output from all 47 species
Solyc09g060080.4.1 Solyc09g060080 component EAF1 of NuA4 histone acetyltransferase complex 0.06 OrthoFinder output from all 47 species
Spa_g42104 No alias component *(EAF1) of NuA4 histone acetyltransferase... 0.03 OrthoFinder output from all 47 species
Tin_g13754 No alias component *(EAF1) of NuA4 histone acetyltransferase... 0.03 OrthoFinder output from all 47 species
Zm00001e020520_P002 Zm00001e020520 component EAF1 of NuA4 histone acetyltransferase complex 0.1 OrthoFinder output from all 47 species
Zm00001e020521_P001 Zm00001e020521 component EAF1 of NuA4 histone acetyltransferase complex 0.03 OrthoFinder output from all 47 species
Zm00001e026671_P001 Zm00001e026671 component EAF1 of NuA4 histone acetyltransferase complex 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
CC GO:0048046 apoplast IDA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000038 very long-chain fatty acid metabolic process IEP HCCA
BP GO:0000226 microtubule cytoskeleton organization IEP HCCA
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
BP GO:0000902 cell morphogenesis IEP HCCA
BP GO:0000910 cytokinesis IEP HCCA
BP GO:0000911 cytokinesis by cell plate formation IEP HCCA
BP GO:0001666 response to hypoxia IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0004402 histone acetyltransferase activity IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
MF GO:0005527 macrolide binding IEP HCCA
MF GO:0005528 FK506 binding IEP HCCA
CC GO:0005829 cytosol IEP HCCA
CC GO:0005911 cell-cell junction IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006473 protein acetylation IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007163 establishment or maintenance of cell polarity IEP HCCA
MF GO:0008080 N-acetyltransferase activity IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0009292 horizontal gene transfer IEP HCCA
BP GO:0009294 DNA-mediated transformation IEP HCCA
BP GO:0009409 response to cold IEP HCCA
CC GO:0009506 plasmodesma IEP HCCA
BP GO:0009606 tropism IEP HCCA
BP GO:0009628 response to abiotic stimulus IEP HCCA
BP GO:0009629 response to gravity IEP HCCA
BP GO:0009630 gravitropism IEP HCCA
BP GO:0009639 response to red or far red light IEP HCCA
BP GO:0009640 photomorphogenesis IEP HCCA
BP GO:0009791 post-embryonic development IEP HCCA
BP GO:0009825 multidimensional cell growth IEP HCCA
BP GO:0009880 embryonic pattern specification IEP HCCA
BP GO:0009908 flower development IEP HCCA
BP GO:0009933 meristem structural organization IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010091 trichome branching IEP HCCA
BP GO:0010228 vegetative to reproductive phase transition of meristem IEP HCCA
BP GO:0016049 cell growth IEP HCCA
MF GO:0016407 acetyltransferase activity IEP HCCA
MF GO:0016410 N-acyltransferase activity IEPHCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0016926 protein desumoylation IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
BP GO:0019374 galactolipid metabolic process IEP HCCA
BP GO:0019375 galactolipid biosynthetic process IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
BP GO:0030010 establishment of cell polarity IEP HCCA
CC GO:0030054 cell junction IEP HCCA
CC GO:0031307 obsolete integral component of mitochondrial outer membrane IEP HCCA
BP GO:0032501 multicellular organismal process IEP HCCA
MF GO:0033218 amide binding IEP HCCA
MF GO:0034212 peptide N-acetyltransferase activity IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0040007 growth IEP HCCA
BP GO:0042743 hydrogen peroxide metabolic process IEP HCCA
BP GO:0042744 hydrogen peroxide catabolic process IEP HCCA
BP GO:0042761 very long-chain fatty acid biosynthetic process IEP HCCA
BP GO:0043090 amino acid import IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0048527 lateral root development IEP HCCA
BP GO:0048528 post-embryonic root development IEP HCCA
BP GO:0050665 hydrogen peroxide biosynthetic process IEP HCCA
BP GO:0050826 response to freezing IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
CC GO:0070161 anchoring junction IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0072593 reactive oxygen species metabolic process IEP HCCA
BP GO:0090696 post-embryonic plant organ development IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1903409 reactive oxygen species biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR014012 HSA_dom 570 613
No external refs found!