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AT3G22235


Description : BEST Arabidopsis thaliana protein match is: pathogen and circadian controlled 1 (TAIR:AT3G22231.1); Has 122 Blast hits to 122 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 122; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).


Gene families : OG0001486 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001486_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G22235
Cluster HCCA: Cluster_46

Target Alias Description ECC score Gene Family Method Actions
AT1G56060 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.04 OrthoFinder output from all 47 species
GSVIVT01033573001 No alias No description available 0.04 OrthoFinder output from all 47 species
MA_23620g0030 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_59733g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc09g098310.3.1 Solyc09g098310 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
BP GO:0006950 response to stress IEP HCCA
BP GO:0006952 defense response IEP HCCA
BP GO:0008219 cell death IEP HCCA
BP GO:0009605 response to external stimulus IEP HCCA
BP GO:0009607 response to biotic stimulus IEP HCCA
BP GO:0009615 response to virus IEP HCCA
BP GO:0009617 response to bacterium IEP HCCA
BP GO:0009696 salicylic acid metabolic process IEP HCCA
BP GO:0009697 salicylic acid biosynthetic process IEP HCCA
BP GO:0009751 response to salicylic acid IEP HCCA
BP GO:0018958 phenol-containing compound metabolic process IEP HCCA
BP GO:0019684 photosynthesis, light reaction IEP HCCA
BP GO:0042537 benzene-containing compound metabolic process IEP HCCA
BP GO:0043207 response to external biotic stimulus IEP HCCA
BP GO:0044419 biological process involved in interspecies interaction between organisms IEP HCCA
BP GO:0046189 phenol-containing compound biosynthetic process IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051707 response to other organism IEP HCCA
InterPro domains Description Start Stop
IPR028144 CYSTM_dom 25 71
No external refs found!