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  5. AT3G21120

AT3G21120


Description : F-box and associated interaction domains-containing protein


Gene families : OG0001907 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001907_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G21120

Target Alias Description ECC score Gene Family Method Actions
AT1G11810 No alias F-box associated ubiquitination effector family protein 0.07 OrthoFinder output from all 47 species
AT1G27490 No alias F-box and associated interaction domains-containing protein 0.06 OrthoFinder output from all 47 species
AT1G32140 No alias F-box family protein 0.18 OrthoFinder output from all 47 species
AT1G59680 EDA1 F-box associated ubiquitination effector family protein 0.02 OrthoFinder output from all 47 species
AT1G65990 No alias type 2 peroxiredoxin-related / thiol specific... 0.05 OrthoFinder output from all 47 species
AT1G66490 No alias F-box and associated interaction domains-containing protein 0.11 OrthoFinder output from all 47 species
AT1G67450 No alias F-box and associated interaction domains-containing protein 0.08 OrthoFinder output from all 47 species
AT1G67455 No alias F-box and associated interaction domains-containing protein 0.08 OrthoFinder output from all 47 species
AT1G77650 No alias F-box associated ubiquitination effector family protein 0.05 OrthoFinder output from all 47 species
AT2G24510 No alias F-box associated ubiquitination effector family protein 0.13 OrthoFinder output from all 47 species
AT2G33655 No alias F-box and associated interaction domains-containing protein 0.1 OrthoFinder output from all 47 species
AT2G39355 No alias No description available 0.04 OrthoFinder output from all 47 species
AT3G04250 No alias F-box associated ubiquitination effector family protein 0.04 OrthoFinder output from all 47 species
AT3G13830 No alias F-box and associated interaction domains-containing protein 0.08 OrthoFinder output from all 47 species
AT3G16020 No alias F-box associated ubiquitination effector protein 0.02 OrthoFinder output from all 47 species
AT3G16820 No alias F-box and associated interaction domains-containing protein 0.04 OrthoFinder output from all 47 species
AT3G17280 No alias F-box and associated interaction domains-containing protein 0.04 OrthoFinder output from all 47 species
AT3G17320 No alias F-box and associated interaction domains-containing protein 0.06 OrthoFinder output from all 47 species
AT3G17480 No alias F-box and associated interaction domains-containing protein 0.07 OrthoFinder output from all 47 species
AT3G17540 No alias F-box and associated interaction domains-containing protein 0.15 OrthoFinder output from all 47 species
AT3G17560 No alias F-box and associated interaction domains-containing protein 0.19 OrthoFinder output from all 47 species
AT3G17570 No alias F-box and associated interaction domains-containing protein 0.11 OrthoFinder output from all 47 species
AT3G17620 No alias F-box and associated interaction domains-containing protein 0.05 OrthoFinder output from all 47 species
AT3G18330 No alias F-box family protein 0.07 OrthoFinder output from all 47 species
AT3G19410 No alias F-box and associated interaction domains-containing protein 0.02 OrthoFinder output from all 47 species
AT3G19470 No alias F-box and associated interaction domains-containing protein 0.03 OrthoFinder output from all 47 species
AT3G20030 No alias F-box and associated interaction domains-containing protein 0.05 OrthoFinder output from all 47 species
AT3G20710 No alias F-box family protein 0.05 OrthoFinder output from all 47 species
AT3G22421 No alias F-box and associated interaction domains-containing protein 0.06 OrthoFinder output from all 47 species
AT3G22720 No alias F-box and associated interaction domains-containing protein 0.05 OrthoFinder output from all 47 species
AT3G22770 No alias F-box associated ubiquitination effector family protein 0.06 OrthoFinder output from all 47 species
AT3G22870 No alias F-box and associated interaction domains-containing protein 0.06 OrthoFinder output from all 47 species
AT3G22940 No alias F-box associated ubiquitination effector family protein 0.03 OrthoFinder output from all 47 species
AT3G24580 No alias F-box and associated interaction domains-containing protein 0.04 OrthoFinder output from all 47 species
AT3G25460 No alias F-box and associated interaction domains-containing protein 0.02 OrthoFinder output from all 47 species
AT3G49520 No alias F-box and associated interaction domains-containing protein 0.02 OrthoFinder output from all 47 species
AT4G09870 No alias F-box and associated interaction domains-containing protein 0.16 OrthoFinder output from all 47 species
AT4G10190 No alias F-box and associated interaction domains-containing protein 0.1 OrthoFinder output from all 47 species
AT4G33290 No alias F-box and associated interaction domains-containing protein 0.16 OrthoFinder output from all 47 species
AT5G25195 No alias No description available 0.04 OrthoFinder output from all 47 species
AT5G36200 No alias F-box and associated interaction domains-containing protein 0.09 OrthoFinder output from all 47 species
AT5G41490 No alias F-box associated ubiquitination effector family protein 0.19 OrthoFinder output from all 47 species
AT5G47300 No alias F-box and associated interaction domains-containing protein 0.19 OrthoFinder output from all 47 species
AT5G51000 No alias F-box and associated interaction domains-containing protein 0.06 OrthoFinder output from all 47 species
AT5G62830 No alias F-box associated ubiquitination effector family protein 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005737 cytoplasm ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
MF GO:0003993 acid phosphatase activity IEP HCCA
MF GO:0004721 phosphoprotein phosphatase activity IEP HCCA
MF GO:0004722 protein serine/threonine phosphatase activity IEP HCCA
MF GO:0005337 nucleoside transmembrane transporter activity IEP HCCA
BP GO:0006357 regulation of transcription by RNA polymerase II IEP HCCA
BP GO:0006470 protein dephosphorylation IEP HCCA
MF GO:0008420 RNA polymerase II CTD heptapeptide repeat phosphatase activity IEP HCCA
BP GO:0015858 nucleoside transport IEP HCCA
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP HCCA
BP GO:0016311 dephosphorylation IEP HCCA
MF GO:0016706 2-oxoglutarate-dependent dioxygenase activity IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
BP GO:0018126 protein hydroxylation IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
BP GO:0018401 peptidyl-proline hydroxylation to 4-hydroxy-L-proline IEP HCCA
BP GO:0019511 peptidyl-proline hydroxylation IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
BP GO:0070940 dephosphorylation of RNA polymerase II C-terminal domain IEP HCCA
BP GO:1901264 carbohydrate derivative transport IEP HCCA
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR001810 F-box_dom 2 36
IPR006527 F-box-assoc_dom_typ1 201 359
No external refs found!