1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. AT3G20320

AT3G20320 (TGD2)


Aliases : TGD2

Description : trigalactosyldiacylglycerol2


Gene families : OG0002728 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002728_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G20320
Cluster HCCA: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
Cba_g78288 TGD2 substrate binding component *(TGD2) of TGD lipid... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000498.66 No alias Lipid metabolism.lipid transport.plastidial lipid... 0.01 OrthoFinder output from all 47 species
Cre16.g694400 TGD2 Lipid metabolism.lipid transport.plastidial lipid... 0.02 OrthoFinder output from all 47 species
Pir_g15692 TGD2 substrate binding component *(TGD2) of TGD lipid... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005319 lipid transporter activity IMP Interproscan
MF GO:0005543 phospholipid binding IDA Interproscan
BP GO:0006869 lipid transport IMP Interproscan
CC GO:0009507 chloroplast IDA Interproscan
CC GO:0009507 chloroplast ISM Interproscan
CC GO:0009536 plastid IDA Interproscan
CC GO:0009706 chloroplast inner membrane IDA Interproscan
CC GO:0009941 chloroplast envelope IDA Interproscan
BP GO:0010207 photosystem II assembly RCA Interproscan
CC GO:0016020 membrane IDA Interproscan
CC GO:0016020 membrane ISS Interproscan
BP GO:0032365 intracellular lipid transport IMP Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003916 DNA topoisomerase activity IEP HCCA
MF GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
BP GO:0006261 DNA-templated DNA replication IEP HCCA
BP GO:0006265 DNA topological change IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007059 chromosome segregation IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
CC GO:0009295 nucleoid IEP HCCA
CC GO:0009330 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) complex IEP HCCA
BP GO:0009662 etioplast organization IEP HCCA
MF GO:0009982 pseudouridine synthase activity IEP HCCA
BP GO:0016108 tetraterpenoid metabolic process IEP HCCA
BP GO:0016109 tetraterpenoid biosynthetic process IEP HCCA
BP GO:0016116 carotenoid metabolic process IEP HCCA
BP GO:0016117 carotenoid biosynthetic process IEP HCCA
BP GO:0016485 protein processing IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0046148 pigment biosynthetic process IEP HCCA
MF GO:0046608 carotenoid isomerase activity IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
InterPro domains Description Start Stop
IPR003399 Mce/MlaD 128 203
No external refs found!