AT3G19960 (ATM1)

Aliases : ATM1

Description : myosin 1

Gene families : OG0000203 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000203_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT3G19960

Target	Alias	Description	ECC score	Gene Family Method
AT4G33200	XI-15, ATXI-I, XI-I	myosin, putative	0.04	OrthoFinder output from all 47 species
Adi_g055863	XIC, ATXIC	class XI myosin microfilament-based motor protein &...	0.02	OrthoFinder output from all 47 species
Adi_g089073	ATVIIIA, VIIIA	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aev_g46207	XIC, ATXIC	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g07782	ATXIK, XI-17, XIK	class XI myosin microfilament-based motor protein &...	0.02	OrthoFinder output from all 47 species
Cba_g72787	XIC, ATXIC	class XI myosin microfilament-based motor protein &...	0.04	OrthoFinder output from all 47 species
Ceric.37G005700.1	ATXIK, XI-17,...	class XI myosin microfilament-based motor protein &...	0.03	OrthoFinder output from all 47 species
Dcu_g06522	ATVIIIA, VIIIA	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Dcu_g17314	ATXIK, XI-17, XIK	class XI myosin microfilament-based motor protein &...	0.02	OrthoFinder output from all 47 species
GSVIVT01034427001	ATVIIIA, VIIIA	Cytoskeleton.microfilament network.myosin...	0.03	OrthoFinder output from all 47 species
GSVIVT01036267001	ATXIE, XIE	Cytoskeleton.microfilament network.myosin...	0.03	OrthoFinder output from all 47 species
MA_20378g0010	XIC, ATXIC	class XI myosin microfilament-based motor protein	0.03	OrthoFinder output from all 47 species
Mp3g23480.1	ATVIIIA, VIIIA	class VIII myosin microfilament-based motor protein	0.02	OrthoFinder output from all 47 species
Msp_g31802	ATVIIIA, VIIIA	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Nbi_g09070	ATXIK, XI-17, XIK	class XI myosin microfilament-based motor protein &...	0.03	OrthoFinder output from all 47 species
Nbi_g20512	ATXIK, XI-17, XIK	class XI myosin microfilament-based motor protein &...	0.02	OrthoFinder output from all 47 species
Ore_g16659	XIC, ATXIC	class XI myosin microfilament-based motor protein &...	0.02	OrthoFinder output from all 47 species
Ppi_g09501	ATVIIIA, VIIIA	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g13599	ATXIK, XI-17, XIK	class XI myosin microfilament-based motor protein &...	0.02	OrthoFinder output from all 47 species
Solyc10g006820.4.1	ATMYOS1, ATM4,...	class VIII myosin microfilament-based motor protein	0.04	OrthoFinder output from all 47 species
Zm00001e012626_P001	ATVIIIA, VIIIA,...	class VIII myosin microfilament-based motor protein	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003774	cytoskeletal motor activity	ISS	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005768	endosome	IDA	Interproscan
CC	GO:0005783	endoplasmic reticulum	IDA	Interproscan
CC	GO:0005886	plasma membrane	IDA	Interproscan
BP	GO:0006473	protein acetylation	RCA	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
CC	GO:0009504	cell plate	IDA	Interproscan
CC	GO:0009524	phragmoplast	IDA	Interproscan
BP	GO:0009987	cellular process	None	Extended
CC	GO:0016020	membrane	None	Extended
CC	GO:0016459	myosin complex	ISS	Interproscan
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0030029	actin filament-based process	None	Extended
BP	GO:0030048	actin filament-based movement	TAS	Interproscan
CC	GO:0031410	cytoplasmic vesicle	None	Extended
CC	GO:0031982	vesicle	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0043543	protein acylation	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0097708	intracellular vesicle	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000272	polysaccharide catabolic process	IEP	HCCA
BP	GO:0002237	response to molecule of bacterial origin	IEP	HCCA
MF	GO:0003777	microtubule motor activity	IEP	HCCA
MF	GO:0003824	catalytic activity	IEP	HCCA
MF	GO:0003968	RNA-dependent RNA polymerase activity	IEP	HCCA
MF	GO:0004565	beta-galactosidase activity	IEP	HCCA
MF	GO:0004620	phospholipase activity	IEP	HCCA
MF	GO:0004629	phospholipase C activity	IEP	HCCA
MF	GO:0005543	phospholipid binding	IEP	HCCA
BP	GO:0005983	starch catabolic process	IEP	HCCA
BP	GO:0006468	protein phosphorylation	IEP	HCCA
BP	GO:0006555	methionine metabolic process	IEP	HCCA
BP	GO:0007165	signal transduction	IEP	HCCA
MF	GO:0008081	phosphoric diester hydrolase activity	IEP	HCCA
BP	GO:0009067	aspartate family amino acid biosynthetic process	IEP	HCCA
BP	GO:0009086	methionine biosynthetic process	IEP	HCCA
BP	GO:0009251	glucan catabolic process	IEP	HCCA
CC	GO:0009574	preprophase band	IEP	HCCA
BP	GO:0009799	specification of symmetry	IEP	HCCA
BP	GO:0009855	determination of bilateral symmetry	IEP	HCCA
BP	GO:0009887	animal organ morphogenesis	IEP	HCCA
BP	GO:0010016	shoot system morphogenesis	IEP	HCCA
BP	GO:0010025	wax biosynthetic process	IEP	HCCA
BP	GO:0010051	xylem and phloem pattern formation	IEP	HCCA
BP	GO:0010166	wax metabolic process	IEP	HCCA
BP	GO:0010215	cellulose microfibril organization	IEP	HCCA
MF	GO:0015925	galactosidase activity	IEP	HCCA
MF	GO:0016298	lipase activity	IEP	HCCA
BP	GO:0016310	phosphorylation	IEP	HCCA
BP	GO:0016441	post-transcriptional gene silencing	IEP	HCCA
MF	GO:0016740	transferase activity	IEP	HCCA
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	HCCA
MF	GO:0016781	phosphotransferase activity, paired acceptors	IEP	HCCA
MF	GO:0019200	carbohydrate kinase activity	IEP	HCCA
BP	GO:0030198	extracellular matrix organization	IEP	HCCA
MF	GO:0030246	carbohydrate binding	IEP	HCCA
MF	GO:0034062	5'-3' RNA polymerase activity	IEP	HCCA
MF	GO:0035091	phosphatidylinositol binding	IEP	HCCA
BP	GO:0043062	extracellular structure organization	IEP	HCCA
BP	GO:0044247	cellular polysaccharide catabolic process	IEP	HCCA
BP	GO:0044275	cellular carbohydrate catabolic process	IEP	HCCA
BP	GO:0045229	external encapsulating structure organization	IEP	HCCA
BP	GO:0048439	flower morphogenesis	IEP	HCCA
BP	GO:0048443	stamen development	IEP	HCCA
BP	GO:0050789	regulation of biological process	IEP	HCCA
BP	GO:0050794	regulation of cellular process	IEP	HCCA
BP	GO:0051645	Golgi localization	IEP	HCCA
BP	GO:0051646	mitochondrion localization	IEP	HCCA
MF	GO:0051752	phosphoglucan, water dikinase activity	IEP	HCCA
BP	GO:0060147	regulation of post-transcriptional gene silencing	IEP	HCCA
BP	GO:0060148	positive regulation of post-transcriptional gene silencing	IEP	HCCA
BP	GO:0060151	peroxisome localization	IEP	HCCA
BP	GO:0065007	biological regulation	IEP	HCCA
BP	GO:0090698	post-embryonic plant morphogenesis	IEP	HCCA
MF	GO:0097747	RNA polymerase activity	IEP	HCCA
CC	GO:0098588	bounding membrane of organelle	IEP	HCCA
MF	GO:0140657	ATP-dependent activity	IEP	HCCA
BP	GO:1901568	fatty acid derivative metabolic process	IEP	HCCA
BP	GO:1901570	fatty acid derivative biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001609	Myosin_head_motor_dom	167	825
IPR000048	IQ_motif_EF-hand-BS	843	859
IPR000048	IQ_motif_EF-hand-BS	913	929

External Links

No external refs found!

AT3G19960 (ATM1)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation