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  5. AT3G19570

AT3G19570 (SCO3, QWRF1)


Aliases : SCO3, QWRF1

Description : Family of unknown function (DUF566)


Gene families : OG0000808 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000808_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G19570

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00137p00083250 QWRF2,... Cytoskeleton.microtubular network.microtubule Tubulin... 0.02 OrthoFinder output from all 47 species
Adi_g014772 SCO3, QWRF1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g066496 QWRF2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g125044 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g11033 QWRF2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g31553 QWRF4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g11099 QWRF2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g50787 QWRF2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0107.g045161 QWRF2 not classified & original description: CDS=1-2640 0.03 OrthoFinder output from all 47 species
Ceric.15G073800.1 QWRF8, Ceric.15G073800 not classified & original description: pacid=50640005... 0.04 OrthoFinder output from all 47 species
Ceric.26G026100.1 QWRF2, Ceric.26G026100 not classified & original description: pacid=50599706... 0.02 OrthoFinder output from all 47 species
Ceric.37G061400.1 QWRF2, Ceric.37G061400 not classified & original description: pacid=50616607... 0.06 OrthoFinder output from all 47 species
Dac_g01735 QWRF2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g44835 SCO3, QWRF1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01009361001 QWRF2 QWRF motif-containing protein 2 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01037854001 QWRF2 Protein SNOWY COTYLEDON 3 OS=Arabidopsis thaliana 0.07 OrthoFinder output from all 47 species
LOC_Os08g34320.1 QWRF8, LOC_Os08g34320 AUGMIN subunit 8 OS=Arabidopsis thaliana... 0.07 OrthoFinder output from all 47 species
LOC_Os10g20510.1 QWRF2, LOC_Os10g20510 Protein SNOWY COTYLEDON 3 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Len_g55397 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g56594 QWRF8 not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_100179g0010 QWRF2 QWRF motif-containing protein 2 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_11175g0010 QWRF8 AUGMIN subunit 8 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
Msp_g38233 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g08015 QWRF2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g15423 QWRF8 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g23431 QWRF8 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g19963 QWRF2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g09328 QWRF8 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g107200.4.1 QWRF2, Solyc01g107200 QWRF motif-containing protein 2 OS=Arabidopsis thaliana... 0.11 OrthoFinder output from all 47 species
Solyc04g078000.3.1 QWRF2, Solyc04g078000 QWRF motif-containing protein 2 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Solyc07g054390.1.1 QWRF3, Solyc07g054390 QWRF motif-containing protein 3 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Spa_g17313 QWRF2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g26567 SCO3, QWRF1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g31039 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g50145 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g50146 QWRF2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g56201 QWRF8 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e000731_P001 QWRF2, Zm00001e000731 Protein SNOWY COTYLEDON 3 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Zm00001e005768_P003 QWRF2, Zm00001e005768 QWRF motif-containing protein 2 OS=Arabidopsis thaliana... 0.09 OrthoFinder output from all 47 species
Zm00001e016106_P002 QWRF8, Zm00001e016106 AUGMIN subunit 8 OS=Arabidopsis thaliana... 0.09 OrthoFinder output from all 47 species
Zm00001e022159_P001 QWRF4, Zm00001e022159 QWRF motif-containing protein 4 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
CC GO:0005777 peroxisome IDA Interproscan
BP GO:0009658 chloroplast organization IMP Interproscan
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Type GO Term Name Evidence Source
BP GO:0000226 microtubule cytoskeleton organization IEP HCCA
BP GO:0000280 nuclear division IEP HCCA
BP GO:0000910 cytokinesis IEP HCCA
BP GO:0000911 cytokinesis by cell plate formation IEP HCCA
MF GO:0001872 (1->3)-beta-D-glucan binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0004402 histone acetyltransferase activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0004674 protein serine/threonine kinase activity IEP HCCA
MF GO:0004888 transmembrane signaling receptor activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005886 plasma membrane IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006473 protein acetylation IEP HCCA
BP GO:0006475 internal protein amino acid acetylation IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0007000 nucleolus organization IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007020 microtubule nucleation IEP HCCA
BP GO:0007051 spindle organization IEP HCCA
BP GO:0007166 cell surface receptor signaling pathway IEP HCCA
BP GO:0007167 enzyme-linked receptor protein signaling pathway IEP HCCA
BP GO:0007169 transmembrane receptor protein tyrosine kinase signaling pathway IEP HCCA
BP GO:0007389 pattern specification process IEP HCCA
MF GO:0008080 N-acetyltransferase activity IEP HCCA
BP GO:0008356 asymmetric cell division IEP HCCA
BP GO:0008361 regulation of cell size IEP HCCA
BP GO:0009664 plant-type cell wall organization IEP HCCA
BP GO:0009786 regulation of asymmetric cell division IEP HCCA
BP GO:0009799 specification of symmetry IEP HCCA
BP GO:0009825 multidimensional cell growth IEP HCCA
BP GO:0009855 determination of bilateral symmetry IEP HCCA
BP GO:0009909 regulation of flower development IEP HCCA
BP GO:0009913 epidermal cell differentiation IEP HCCA
BP GO:0009914 hormone transport IEP HCCA
BP GO:0009926 auxin polar transport IEP HCCA
BP GO:0009933 meristem structural organization IEP HCCA
BP GO:0009956 radial pattern formation IEP HCCA
CC GO:0009986 cell surface IEP HCCA
BP GO:0010014 meristem initiation IEP HCCA
BP GO:0010073 meristem maintenance IEP HCCA
BP GO:0010075 regulation of meristem growth IEP HCCA
BP GO:0010228 vegetative to reproductive phase transition of meristem IEP HCCA
BP GO:0010305 leaf vascular tissue pattern formation IEP HCCA
BP GO:0010311 lateral root formation IEP HCCA
MF GO:0010385 double-stranded methylated DNA binding IEP HCCA
BP GO:0010540 basipetal auxin transport IEP HCCA
BP GO:0010769 regulation of cell morphogenesis involved in differentiation IEP HCCA
CC GO:0016324 apical plasma membrane IEP HCCA
MF GO:0016410 N-acyltransferase activity IEP HCCA
BP GO:0016570 histone modification IEP HCCA
BP GO:0016573 histone acetylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018205 peptidyl-lysine modification IEP HCCA
BP GO:0018393 internal peptidyl-lysine acetylation IEP HCCA
BP GO:0018394 peptidyl-lysine acetylation IEP HCCA
MF GO:0019199 transmembrane receptor protein kinase activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
CC GO:0030139 endocytic vesicle IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
BP GO:0030855 epithelial cell differentiation IEP HCCA
CC GO:0031410 cytoplasmic vesicle IEP HCCA
CC GO:0031982 vesicle IEP HCCA
BP GO:0032501 multicellular organismal process IEP HCCA
MF GO:0034212 peptide N-acetyltransferase activity IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0038023 signaling receptor activity IEP HCCA
BP GO:0040008 regulation of growth IEP HCCA
MF GO:0042393 histone binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0043543 protein acylation IEP HCCA
BP GO:0043966 histone H3 acetylation IEP HCCA
BP GO:0043971 histone H3-K18 acetylation IEP HCCA
BP GO:0043972 histone H3-K23 acetylation IEP HCCA
BP GO:0044030 regulation of DNA methylation IEP HCCA
BP GO:0044154 histone H3-K14 acetylation IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
BP GO:0045595 regulation of cell differentiation IEP HCCA
BP GO:0045596 negative regulation of cell differentiation IEP HCCA
BP GO:0048366 leaf development IEP HCCA
BP GO:0048497 maintenance of floral organ identity IEP HCCA
BP GO:0048532 anatomical structure arrangement IEP HCCA
BP GO:0048638 regulation of developmental growth IEP HCCA
BP GO:0048646 anatomical structure formation involved in morphogenesis IEP HCCA
BP GO:0048825 cotyledon development IEP HCCA
BP GO:0048827 phyllome development IEP HCCA
BP GO:0048829 root cap development IEP HCCA
BP GO:0048831 regulation of shoot system development IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050793 regulation of developmental process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051225 spindle assembly IEP HCCA
BP GO:0051239 regulation of multicellular organismal process IEP HCCA
BP GO:0051301 cell division IEP HCCA
BP GO:0051302 regulation of cell division IEP HCCA
BP GO:0060918 auxin transport IEP HCCA
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0070925 organelle assembly IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0071669 plant-type cell wall organization or biogenesis IEP HCCA
BP GO:0080092 regulation of pollen tube growth IEP HCCA
BP GO:0080188 gene silencing by RNA-directed DNA methylation IEP HCCA
BP GO:0090700 maintenance of plant organ identity IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
CC GO:0097708 intracellular vesicle IEP HCCA
CC GO:0098590 plasma membrane region IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:0140694 non-membrane-bounded organelle assembly IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:1905392 plant organ morphogenesis IEP HCCA
BP GO:1905393 plant organ formation IEP HCCA
BP GO:2000241 regulation of reproductive process IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR007573 QWRF 296 615
No external refs found!