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AT3G18950


Description : Transducin/WD40 repeat-like superfamily protein


Gene families : OG0000309 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000309_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G18950

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00256130 evm_27.TU.AmTr_v1... Protein JINGUBANG OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00059p00197160 evm_27.TU.AmTr_v1... Protein JINGUBANG OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT1G24130 No alias Transducin/WD40 repeat-like superfamily protein 0.04 OrthoFinder output from all 47 species
AT1G49450 No alias Transducin/WD40 repeat-like superfamily protein 0.04 OrthoFinder output from all 47 species
Adi_g023030 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g054356 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g16590 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g47144 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g09174 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g19060 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g39579 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g27534 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g36145 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene05740.t1 Aspi01Gene05740 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene05748.t1 Aspi01Gene05748 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene23387.t1 Aspi01Gene23387 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene23389.t2 Aspi01Gene23389 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene44873.t1 Aspi01Gene44873 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene44877.t1 Aspi01Gene44877 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene45294.t1 Aspi01Gene45294 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene60159.t1 Aspi01Gene60159 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g09340 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g52387 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.12G075900.1 Ceric.12G075900 not classified & original description: pacid=50601390... 0.04 OrthoFinder output from all 47 species
Ceric.28G012400.1 Ceric.28G012400 not classified & original description: pacid=50570345... 0.06 OrthoFinder output from all 47 species
Ceric.28G012600.1 Ceric.28G012600 not classified & original description: pacid=50570711... 0.04 OrthoFinder output from all 47 species
Ceric.28G012700.1 Ceric.28G012700 not classified & original description: pacid=50571070... 0.03 OrthoFinder output from all 47 species
Dac_g25704 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g36315 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g40515 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g19296 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g25993 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01007825001 No alias No description available 0.05 OrthoFinder output from all 47 species
GSVIVT01031882001 No alias Protein JINGUBANG OS=Arabidopsis thaliana 0.07 OrthoFinder output from all 47 species
Gb_14478 No alias Protein JINGUBANG OS=Arabidopsis thaliana... 0.07 OrthoFinder output from all 47 species
Gb_19215 No alias Protein JINGUBANG OS=Arabidopsis thaliana... 0.07 OrthoFinder output from all 47 species
Gb_26404 No alias Protein JINGUBANG OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Gb_27340 No alias Protein JINGUBANG OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os03g52870.1 LOC_Os03g52870 Protein JINGUBANG OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
MA_370291g0010 No alias Protein JINGUBANG OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
MA_634003g0010 No alias Protein JINGUBANG OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_913477g0010 No alias Protein JINGUBANG OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Msp_g34011 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g10069 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g31777 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g14258 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g16677 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g19634 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g25659 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g08501 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g29617 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g60508 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0113.g020851 No alias not classified & original description: CDS=1-1557 0.04 OrthoFinder output from all 47 species
Smo66275 No alias Protein JINGUBANG OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Solyc01g068250.2.1 Solyc01g068250 Protein JINGUBANG OS=Arabidopsis thaliana... 0.07 OrthoFinder output from all 47 species
Solyc01g109120.3.1 Solyc01g109120 Protein JINGUBANG OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Solyc03g111780.1.1 Solyc03g111780 Protein JINGUBANG OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Solyc04g005020.3.1 Solyc04g005020 Protein JINGUBANG OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc05g006340.3.1 Solyc05g006340 Protein JINGUBANG OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Spa_g06919 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g44621 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g48688 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g17869 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g19133 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e007790_P001 Zm00001e007790 Protein JINGUBANG OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Zm00001e015781_P001 Zm00001e015781 Protein JINGUBANG OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e041085_P001 Zm00001e041085 Protein JINGUBANG OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding ISS Interproscan
BP GO:0008150 biological_process ND Interproscan
CC GO:0009507 chloroplast ISM Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0016301 kinase activity IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 375 406
IPR001680 WD40_repeat 248 276
IPR001680 WD40_repeat 416 462
IPR001680 WD40_repeat 138 164
IPR001680 WD40_repeat 282 318
No external refs found!