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  5. AT3G18840

AT3G18840


No description available


Gene families : OG0030390 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0030390_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G18840
Cluster HCCA: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
Solyc01g095600.4.1 Solyc01g095600 Putative pentatricopeptide repeat-containing protein... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005739 mitochondrion ISM Interproscan
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Type GO Term Name Evidence Source
CC GO:0000418 RNA polymerase IV complex IEP HCCA
CC GO:0000428 DNA-directed RNA polymerase complex IEP HCCA
MF GO:0003720 telomerase activity IEP HCCA
MF GO:0003721 telomerase RNA reverse transcriptase activity IEP HCCA
MF GO:0003964 RNA-directed DNA polymerase activity IEP HCCA
CC GO:0005654 nucleoplasm IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006278 RNA-templated DNA biosynthetic process IEP HCCA
BP GO:0007000 nucleolus organization IEP HCCA
BP GO:0007004 telomere maintenance via telomerase IEP HCCA
CC GO:0009295 nucleoid IEP HCCA
BP GO:0009894 regulation of catabolic process IEP HCCA
BP GO:0009896 positive regulation of catabolic process IEP HCCA
BP GO:0010495 siRNA-mediated long-distance post-transcriptional gene silencing IEP HCCA
BP GO:0010833 telomere maintenance via telomere lengthening IEP HCCA
BP GO:0016569 obsolete covalent chromatin modification IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0017148 negative regulation of translation IEP HCCA
CC GO:0030880 RNA polymerase complex IEP HCCA
BP GO:0031329 regulation of cellular catabolic process IEP HCCA
BP GO:0031331 positive regulation of cellular catabolic process IEP HCCA
MF GO:0034061 DNA polymerase activity IEP HCCA
BP GO:0034249 negative regulation of amide metabolic process IEP HCCA
BP GO:0043487 regulation of RNA stability IEP HCCA
BP GO:0043488 regulation of mRNA stability IEP HCCA
BP GO:0050000 chromosome localization IEP HCCA
BP GO:0050779 RNA destabilization IEP HCCA
BP GO:0051026 chiasma assembly IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
CC GO:0055029 nuclear DNA-directed RNA polymerase complex IEP HCCA
BP GO:0061013 regulation of mRNA catabolic process IEP HCCA
BP GO:0061014 positive regulation of mRNA catabolic process IEP HCCA
BP GO:0061157 mRNA destabilization IEP HCCA
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP HCCA
BP GO:0071897 DNA biosynthetic process IEP HCCA
BP GO:0090625 siRNA-mediated gene silencing by mRNA destabilization IEP HCCA
BP GO:0140766 siRNA-mediated gene silencing IEP HCCA
BP GO:1903311 regulation of mRNA metabolic process IEP HCCA
BP GO:1903313 positive regulation of mRNA metabolic process IEP HCCA
BP GO:2000113 negative regulation of cellular macromolecule biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!