AMTR_s00049p00173980 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00049.162

Description : Cytoskeleton.actin and tubulin folding.CCT chaperonin folding complex.CCT5 epsilon subunit


Gene families : OG_01_0004710 (Archaeplastida) Phylogenetic Tree(s): OG_01_0004710_tree ,
OG_02_0005028 (LandPlants) Phylogenetic Tree(s): OG_02_0005028_tree ,
OG_03_0005314 (SeedPlants) Phylogenetic Tree(s): OG_03_0005314_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00049p00173980
Cluster HCCA: Cluster_241

Target Alias Description ECC score Gene Family Method Actions
AT1G24510 No alias TCP-1/cpn60 chaperonin family protein 0.09 Archaeplastida
Cpa|evm.model.tig00000571.47 No alias Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.02 Archaeplastida
Cre03.g156750 No alias Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.06 Archaeplastida
GSVIVT01000590001 No alias Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.04 Archaeplastida
GSVIVT01020856001 No alias Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.08 Archaeplastida
Gb_12826 No alias CCT5 subunit epsilon of CCT chaperonin folding complex 0.05 Archaeplastida
Gb_40545 No alias CCT5 subunit epsilon of CCT chaperonin folding complex 0.04 Archaeplastida
LOC_Os06g36700.1 No alias CCT5 subunit epsilon of CCT chaperonin folding complex 0.09 Archaeplastida
MA_10435597g0010 No alias CCT5 subunit epsilon of CCT chaperonin folding complex 0.07 Archaeplastida
Mp7g17510.1 No alias CCT5 subunit epsilon of CCT chaperonin folding complex 0.07 Archaeplastida
Pp3c20_23570V3.1 No alias TCP-1/cpn60 chaperonin family protein 0.07 Archaeplastida
Smo158694 No alias Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.09 Archaeplastida
Solyc05g013990.3.1 No alias CCT5 subunit epsilon of CCT chaperonin folding complex 0.08 Archaeplastida
Zm00001e011557_P001 No alias CCT5 subunit epsilon of CCT chaperonin folding complex 0.07 Archaeplastida
Zm00001e032727_P001 No alias CCT5 subunit epsilon of CCT chaperonin folding complex 0.08 Archaeplastida
AT1G24510 No alias TCP-1/cpn60 chaperonin family protein 0.08 LandPlants
GSVIVT01000590001 No alias Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.04 LandPlants
GSVIVT01020856001 No alias Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.08 LandPlants
Gb_12826 No alias CCT5 subunit epsilon of CCT chaperonin folding complex 0.05 LandPlants
Gb_40545 No alias CCT5 subunit epsilon of CCT chaperonin folding complex 0.04 LandPlants
LOC_Os06g36700.1 No alias CCT5 subunit epsilon of CCT chaperonin folding complex 0.09 LandPlants
MA_10435597g0010 No alias CCT5 subunit epsilon of CCT chaperonin folding complex 0.07 LandPlants
Mp7g17510.1 No alias CCT5 subunit epsilon of CCT chaperonin folding complex 0.06 LandPlants
Pp3c20_23570V3.1 No alias TCP-1/cpn60 chaperonin family protein 0.06 LandPlants
Smo158694 No alias Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.09 LandPlants
Solyc05g013990.3.1 No alias CCT5 subunit epsilon of CCT chaperonin folding complex 0.08 LandPlants
Zm00001e011557_P001 No alias CCT5 subunit epsilon of CCT chaperonin folding complex 0.07 LandPlants
Zm00001e032727_P001 No alias CCT5 subunit epsilon of CCT chaperonin folding complex 0.08 LandPlants
AT1G24510 No alias TCP-1/cpn60 chaperonin family protein 0.08 SeedPlants
GSVIVT01000590001 No alias Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.04 SeedPlants
GSVIVT01020856001 No alias Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.08 SeedPlants
Gb_12826 No alias CCT5 subunit epsilon of CCT chaperonin folding complex 0.04 SeedPlants
Gb_40545 No alias CCT5 subunit epsilon of CCT chaperonin folding complex 0.04 SeedPlants
LOC_Os06g36700.1 No alias CCT5 subunit epsilon of CCT chaperonin folding complex 0.09 SeedPlants
MA_10435597g0010 No alias CCT5 subunit epsilon of CCT chaperonin folding complex 0.06 SeedPlants
Solyc05g013990.3.1 No alias CCT5 subunit epsilon of CCT chaperonin folding complex 0.08 SeedPlants
Zm00001e011557_P001 No alias CCT5 subunit epsilon of CCT chaperonin folding complex 0.07 SeedPlants
Zm00001e032727_P001 No alias CCT5 subunit epsilon of CCT chaperonin folding complex 0.07 SeedPlants

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0044267 cellular protein metabolic process IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002423 Cpn60/TCP-1 120 611
No external refs found!