AT3G18660 (PGSIP1, GUX1)


Aliases : PGSIP1, GUX1

Description : plant glycogenin-like starch initiation protein 1


Gene families : OG0002672 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002672_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G18660
Cluster HCCA: Cluster_19

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00245930 PGSIP3, GUX2,... Cell... 0.05 OrthoFinder output from all 47 species
AMTR_s00060p00013040 PGSIP3, GUX2,... Cell... 0.04 OrthoFinder output from all 47 species
AMTR_s00071p00107830 PGSIP1, GUX1,... Cell... 0.03 OrthoFinder output from all 47 species
AT1G08990 PGSIP5 plant glycogenin-like starch initiation protein 5 0.04 OrthoFinder output from all 47 species
AT4G33330 PGSIP3, GUX2 plant glycogenin-like starch initiation protein 3 0.04 OrthoFinder output from all 47 species
Aev_g06661 PGSIP2, GUX3 glucuronosyltransferase *(GUX) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g06290 PGSIP2, GUX3 glucuronosyltransferase *(GUX) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05031 PGSIP2, GUX3 glucuronosyltransferase *(GUX) & original description: none 0.07 OrthoFinder output from all 47 species
Als_g38125 PGSIP2, GUX3 glucuronosyltransferase *(GUX) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g04525 PGSIP2, GUX3 glucuronosyltransferase *(GUX) & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g10280 PGSIP2, GUX3 glucuronosyltransferase *(GUX) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g62374 PGSIP2, GUX3 glucuronosyltransferase *(GUX) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.39G020600.1 PGSIP2, GUX3,... glucuronosyltransferase *(GUX) & original description:... 0.11 OrthoFinder output from all 47 species
Dcu_g01641 PGSIP2, GUX3 glucuronosyltransferase *(GUX) & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g25293 PGSIP1, GUX1 glucuronosyltransferase *(GUX) & original description: none 0.11 OrthoFinder output from all 47 species
Dde_g21504 PGSIP2, GUX3 glucuronosyltransferase *(GUX) & original description: none 0.06 OrthoFinder output from all 47 species
GSVIVT01000046001 PGSIP4 Cell... 0.04 OrthoFinder output from all 47 species
GSVIVT01009501001 PGSIP3, GUX2 Cell... 0.27 OrthoFinder output from all 47 species
GSVIVT01026525001 PGSIP1, GUX1 Cell... 0.24 OrthoFinder output from all 47 species
Gb_06192 PGSIP1, GUX1 glucuronosyltransferase (GUX) 0.15 OrthoFinder output from all 47 species
LOC_Os01g65780.2 PGSIP1, GUX1,... glucuronosyltransferase (GUX) 0.03 OrthoFinder output from all 47 species
LOC_Os02g35020.1 PGSIP1, GUX1,... glucuronosyltransferase (GUX) 0.02 OrthoFinder output from all 47 species
LOC_Os03g08600.1 PGSIP3, GUX2,... glucuronosyltransferase (GUX) 0.13 OrthoFinder output from all 47 species
Len_g19254 PGSIP2, GUX3 glucuronosyltransferase *(GUX) & original description: none 0.03 OrthoFinder output from all 47 species
Len_g29117 PGSIP2, GUX3 glucuronosyltransferase *(GUX) & original description: none 0.09 OrthoFinder output from all 47 species
Lfl_g02012 PGSIP2, GUX3 glucuronosyltransferase *(GUX) & original description: none 0.09 OrthoFinder output from all 47 species
Lfl_g13941 PGSIP2, GUX3 glucuronosyltransferase *(GUX) & original description: none 0.09 OrthoFinder output from all 47 species
MA_35705g0010 PGSIP1, GUX1 glucuronosyltransferase (GUX) 0.07 OrthoFinder output from all 47 species
MA_8597011g0010 PGSIP2, GUX3 glucuronosyltransferase (GUX) 0.1 OrthoFinder output from all 47 species
Msp_g09840 PGSIP2, GUX3 glucuronosyltransferase *(GUX) & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g01150 PGSIP2, GUX3 glucuronosyltransferase *(GUX) & original description: none 0.07 OrthoFinder output from all 47 species
Nbi_g02342 PGSIP2, GUX3 glucuronosyltransferase *(GUX) & original description: none 0.06 OrthoFinder output from all 47 species
Pir_g07503 PGSIP2, GUX3 glucuronosyltransferase *(GUX) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g46456 PGSIP2, GUX3 glucuronosyltransferase *(GUX) & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g16817 No alias glucuronosyltransferase *(GUX) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc04g078990.4.1 PGSIP3, GUX2,... glucuronosyltransferase (GUX) 0.09 OrthoFinder output from all 47 species
Solyc11g005760.3.1 PGSIP1, GUX1,... glucuronosyltransferase (GUX) 0.07 OrthoFinder output from all 47 species
Spa_g02625 PGSIP2, GUX3 glucuronosyltransferase *(GUX) & original description: none 0.14 OrthoFinder output from all 47 species
Spa_g30363 PGSIP2, GUX3 glucuronosyltransferase *(GUX) & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g37307 PGSIP2, GUX3 glucuronosyltransferase *(GUX) & original description: none 0.1 OrthoFinder output from all 47 species
Tin_g02808 PGSIP2, GUX3 glucuronosyltransferase *(GUX) & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g04683 PGSIP2, GUX3 glucuronosyltransferase *(GUX) & original description: none 0.07 OrthoFinder output from all 47 species
Zm00001e000623_P001 PGSIP3, GUX2,... glucuronosyltransferase (GUX) 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
CC GO:0005794 Golgi apparatus IDA Interproscan
BP GO:0005982 starch metabolic process IMP Interproscan
BP GO:0009058 biosynthetic process ISS Interproscan
BP GO:0009834 plant-type secondary cell wall biogenesis IGI Interproscan
BP GO:0010413 glucuronoxylan metabolic process RCA Interproscan
BP GO:0010417 glucuronoxylan biosynthetic process IMP Interproscan
MF GO:0015020 glucuronosyltransferase activity IDA Interproscan
MF GO:0016757 glycosyltransferase activity ISS Interproscan
BP GO:0045492 xylan biosynthetic process IDA Interproscan
BP GO:0045492 xylan biosynthetic process IGI Interproscan
BP GO:0045492 xylan biosynthetic process RCA Interproscan
MF GO:0080116 glucuronoxylan glucuronosyltransferase activity IMP Interproscan
Type GO Term Name Evidence Source
MF GO:0004568 chitinase activity IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005885 Arp2/3 protein complex IEP HCCA
CC GO:0005886 plasma membrane IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0009698 phenylpropanoid metabolic process IEP HCCA
BP GO:0009699 phenylpropanoid biosynthetic process IEP HCCA
BP GO:0009808 lignin metabolic process IEP HCCA
BP GO:0009809 lignin biosynthetic process IEP HCCA
BP GO:0009888 tissue development IEP HCCA
BP GO:0009891 positive regulation of biosynthetic process IEP HCCA
BP GO:0009893 positive regulation of metabolic process IEP HCCA
BP GO:0009900 dehiscence IEP HCCA
BP GO:0010047 fruit dehiscence IEP HCCA
BP GO:0010087 phloem or xylem histogenesis IEP HCCA
BP GO:0010089 xylem development IEP HCCA
BP GO:0010115 regulation of abscisic acid biosynthetic process IEP HCCA
BP GO:0010116 positive regulation of abscisic acid biosynthetic process IEP HCCA
BP GO:0010228 vegetative to reproductive phase transition of meristem IEP HCCA
BP GO:0010395 rhamnogalacturonan I metabolic process IEP HCCA
BP GO:0010400 rhamnogalacturonan I side chain metabolic process IEP HCCA
BP GO:0010557 positive regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0010565 regulation of cellular ketone metabolic process IEP HCCA
BP GO:0010604 positive regulation of macromolecule metabolic process IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
BP GO:0016926 protein desumoylation IEP HCCA
BP GO:0019216 regulation of lipid metabolic process IEP HCCA
BP GO:0019747 regulation of isoprenoid metabolic process IEP HCCA
BP GO:0019748 secondary metabolic process IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
MF GO:0030775 glucuronoxylan 4-O-methyltransferase activity IEP HCCA
CC GO:0031225 obsolete anchored component of membrane IEP HCCA
BP GO:0031325 positive regulation of cellular metabolic process IEP HCCA
BP GO:0031328 positive regulation of cellular biosynthetic process IEP HCCA
BP GO:0042743 hydrogen peroxide metabolic process IEP HCCA
BP GO:0043455 regulation of secondary metabolic process IEP HCCA
BP GO:0044087 regulation of cellular component biogenesis IEP HCCA
BP GO:0044550 secondary metabolite biosynthetic process IEP HCCA
BP GO:0045828 positive regulation of isoprenoid metabolic process IEP HCCA
BP GO:0045834 positive regulation of lipid metabolic process IEP HCCA
BP GO:0045893 positive regulation of DNA-templated transcription IEP HCCA
BP GO:0045935 positive regulation of nucleobase-containing compound metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0046889 positive regulation of lipid biosynthetic process IEP HCCA
BP GO:0046890 regulation of lipid biosynthetic process IEP HCCA
MF GO:0047262 polygalacturonate 4-alpha-galacturonosyltransferase activity IEP HCCA
BP GO:0048518 positive regulation of biological process IEP HCCA
BP GO:0048522 positive regulation of cellular process IEP HCCA
BP GO:0048856 anatomical structure development IEP HCCA
BP GO:0050665 hydrogen peroxide biosynthetic process IEP HCCA
BP GO:0050832 defense response to fungus IEP HCCA
BP GO:0051173 positive regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051254 positive regulation of RNA metabolic process IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
BP GO:0052546 cell wall pectin metabolic process IEP HCCA
BP GO:0062013 positive regulation of small molecule metabolic process IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0072593 reactive oxygen species metabolic process IEP HCCA
BP GO:1902680 positive regulation of RNA biosynthetic process IEP HCCA
BP GO:1902930 regulation of alcohol biosynthetic process IEP HCCA
BP GO:1902932 positive regulation of alcohol biosynthetic process IEP HCCA
BP GO:1903338 regulation of cell wall organization or biogenesis IEP HCCA
BP GO:1903409 reactive oxygen species biosynthetic process IEP HCCA
BP GO:1903508 positive regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2000652 regulation of secondary cell wall biogenesis IEP HCCA
InterPro domains Description Start Stop
IPR002495 Glyco_trans_8 324 428
No external refs found!