Aliases : PGSIP1, GUX1
Description : plant glycogenin-like starch initiation protein 1
Gene families : OG0002672 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002672_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: AT3G18660 | |
Cluster | HCCA: Cluster_19 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00025p00245930 | PGSIP3, GUX2,... | Cell... | 0.05 | OrthoFinder output from all 47 species | |
AMTR_s00060p00013040 | PGSIP3, GUX2,... | Cell... | 0.04 | OrthoFinder output from all 47 species | |
AMTR_s00071p00107830 | PGSIP1, GUX1,... | Cell... | 0.03 | OrthoFinder output from all 47 species | |
AT1G08990 | PGSIP5 | plant glycogenin-like starch initiation protein 5 | 0.04 | OrthoFinder output from all 47 species | |
AT4G33330 | PGSIP3, GUX2 | plant glycogenin-like starch initiation protein 3 | 0.04 | OrthoFinder output from all 47 species | |
Aev_g06661 | PGSIP2, GUX3 | glucuronosyltransferase *(GUX) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ala_g06290 | PGSIP2, GUX3 | glucuronosyltransferase *(GUX) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Als_g05031 | PGSIP2, GUX3 | glucuronosyltransferase *(GUX) & original description: none | 0.07 | OrthoFinder output from all 47 species | |
Als_g38125 | PGSIP2, GUX3 | glucuronosyltransferase *(GUX) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aop_g04525 | PGSIP2, GUX3 | glucuronosyltransferase *(GUX) & original description: none | 0.06 | OrthoFinder output from all 47 species | |
Aop_g10280 | PGSIP2, GUX3 | glucuronosyltransferase *(GUX) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Cba_g62374 | PGSIP2, GUX3 | glucuronosyltransferase *(GUX) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ceric.39G020600.1 | PGSIP2, GUX3,... | glucuronosyltransferase *(GUX) & original description:... | 0.11 | OrthoFinder output from all 47 species | |
Dcu_g01641 | PGSIP2, GUX3 | glucuronosyltransferase *(GUX) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Dcu_g25293 | PGSIP1, GUX1 | glucuronosyltransferase *(GUX) & original description: none | 0.11 | OrthoFinder output from all 47 species | |
Dde_g21504 | PGSIP2, GUX3 | glucuronosyltransferase *(GUX) & original description: none | 0.06 | OrthoFinder output from all 47 species | |
GSVIVT01000046001 | PGSIP4 | Cell... | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01009501001 | PGSIP3, GUX2 | Cell... | 0.27 | OrthoFinder output from all 47 species | |
GSVIVT01026525001 | PGSIP1, GUX1 | Cell... | 0.24 | OrthoFinder output from all 47 species | |
Gb_06192 | PGSIP1, GUX1 | glucuronosyltransferase (GUX) | 0.15 | OrthoFinder output from all 47 species | |
LOC_Os01g65780.2 | PGSIP1, GUX1,... | glucuronosyltransferase (GUX) | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os02g35020.1 | PGSIP1, GUX1,... | glucuronosyltransferase (GUX) | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os03g08600.1 | PGSIP3, GUX2,... | glucuronosyltransferase (GUX) | 0.13 | OrthoFinder output from all 47 species | |
Len_g19254 | PGSIP2, GUX3 | glucuronosyltransferase *(GUX) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Len_g29117 | PGSIP2, GUX3 | glucuronosyltransferase *(GUX) & original description: none | 0.09 | OrthoFinder output from all 47 species | |
Lfl_g02012 | PGSIP2, GUX3 | glucuronosyltransferase *(GUX) & original description: none | 0.09 | OrthoFinder output from all 47 species | |
Lfl_g13941 | PGSIP2, GUX3 | glucuronosyltransferase *(GUX) & original description: none | 0.09 | OrthoFinder output from all 47 species | |
MA_35705g0010 | PGSIP1, GUX1 | glucuronosyltransferase (GUX) | 0.07 | OrthoFinder output from all 47 species | |
MA_8597011g0010 | PGSIP2, GUX3 | glucuronosyltransferase (GUX) | 0.1 | OrthoFinder output from all 47 species | |
Msp_g09840 | PGSIP2, GUX3 | glucuronosyltransferase *(GUX) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Nbi_g01150 | PGSIP2, GUX3 | glucuronosyltransferase *(GUX) & original description: none | 0.07 | OrthoFinder output from all 47 species | |
Nbi_g02342 | PGSIP2, GUX3 | glucuronosyltransferase *(GUX) & original description: none | 0.06 | OrthoFinder output from all 47 species | |
Pir_g07503 | PGSIP2, GUX3 | glucuronosyltransferase *(GUX) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ppi_g46456 | PGSIP2, GUX3 | glucuronosyltransferase *(GUX) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Sam_g16817 | No alias | glucuronosyltransferase *(GUX) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Solyc04g078990.4.1 | PGSIP3, GUX2,... | glucuronosyltransferase (GUX) | 0.09 | OrthoFinder output from all 47 species | |
Solyc11g005760.3.1 | PGSIP1, GUX1,... | glucuronosyltransferase (GUX) | 0.07 | OrthoFinder output from all 47 species | |
Spa_g02625 | PGSIP2, GUX3 | glucuronosyltransferase *(GUX) & original description: none | 0.14 | OrthoFinder output from all 47 species | |
Spa_g30363 | PGSIP2, GUX3 | glucuronosyltransferase *(GUX) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Spa_g37307 | PGSIP2, GUX3 | glucuronosyltransferase *(GUX) & original description: none | 0.1 | OrthoFinder output from all 47 species | |
Tin_g02808 | PGSIP2, GUX3 | glucuronosyltransferase *(GUX) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Tin_g04683 | PGSIP2, GUX3 | glucuronosyltransferase *(GUX) & original description: none | 0.07 | OrthoFinder output from all 47 species | |
Zm00001e000623_P001 | PGSIP3, GUX2,... | glucuronosyltransferase (GUX) | 0.06 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0005634 | nucleus | ISM | Interproscan |
CC | GO:0005794 | Golgi apparatus | IDA | Interproscan |
BP | GO:0005982 | starch metabolic process | IMP | Interproscan |
BP | GO:0009058 | biosynthetic process | ISS | Interproscan |
BP | GO:0009834 | plant-type secondary cell wall biogenesis | IGI | Interproscan |
BP | GO:0010413 | glucuronoxylan metabolic process | RCA | Interproscan |
BP | GO:0010417 | glucuronoxylan biosynthetic process | IMP | Interproscan |
MF | GO:0015020 | glucuronosyltransferase activity | IDA | Interproscan |
MF | GO:0016757 | glycosyltransferase activity | ISS | Interproscan |
BP | GO:0045492 | xylan biosynthetic process | IDA | Interproscan |
BP | GO:0045492 | xylan biosynthetic process | IGI | Interproscan |
BP | GO:0045492 | xylan biosynthetic process | RCA | Interproscan |
MF | GO:0080116 | glucuronoxylan glucuronosyltransferase activity | IMP | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004568 | chitinase activity | IEP | HCCA |
CC | GO:0005576 | extracellular region | IEP | HCCA |
CC | GO:0005885 | Arp2/3 protein complex | IEP | HCCA |
CC | GO:0005886 | plasma membrane | IEP | HCCA |
BP | GO:0009250 | glucan biosynthetic process | IEP | HCCA |
BP | GO:0009698 | phenylpropanoid metabolic process | IEP | HCCA |
BP | GO:0009699 | phenylpropanoid biosynthetic process | IEP | HCCA |
BP | GO:0009808 | lignin metabolic process | IEP | HCCA |
BP | GO:0009809 | lignin biosynthetic process | IEP | HCCA |
BP | GO:0009888 | tissue development | IEP | HCCA |
BP | GO:0009891 | positive regulation of biosynthetic process | IEP | HCCA |
BP | GO:0009893 | positive regulation of metabolic process | IEP | HCCA |
BP | GO:0009900 | dehiscence | IEP | HCCA |
BP | GO:0010047 | fruit dehiscence | IEP | HCCA |
BP | GO:0010087 | phloem or xylem histogenesis | IEP | HCCA |
BP | GO:0010089 | xylem development | IEP | HCCA |
BP | GO:0010115 | regulation of abscisic acid biosynthetic process | IEP | HCCA |
BP | GO:0010116 | positive regulation of abscisic acid biosynthetic process | IEP | HCCA |
BP | GO:0010228 | vegetative to reproductive phase transition of meristem | IEP | HCCA |
BP | GO:0010395 | rhamnogalacturonan I metabolic process | IEP | HCCA |
BP | GO:0010400 | rhamnogalacturonan I side chain metabolic process | IEP | HCCA |
BP | GO:0010557 | positive regulation of macromolecule biosynthetic process | IEP | HCCA |
BP | GO:0010565 | regulation of cellular ketone metabolic process | IEP | HCCA |
BP | GO:0010604 | positive regulation of macromolecule metabolic process | IEP | HCCA |
MF | GO:0016759 | cellulose synthase activity | IEP | HCCA |
BP | GO:0016926 | protein desumoylation | IEP | HCCA |
BP | GO:0019216 | regulation of lipid metabolic process | IEP | HCCA |
BP | GO:0019747 | regulation of isoprenoid metabolic process | IEP | HCCA |
BP | GO:0019748 | secondary metabolic process | IEP | HCCA |
BP | GO:0030243 | cellulose metabolic process | IEP | HCCA |
BP | GO:0030244 | cellulose biosynthetic process | IEP | HCCA |
MF | GO:0030775 | glucuronoxylan 4-O-methyltransferase activity | IEP | HCCA |
CC | GO:0031225 | obsolete anchored component of membrane | IEP | HCCA |
BP | GO:0031325 | positive regulation of cellular metabolic process | IEP | HCCA |
BP | GO:0031328 | positive regulation of cellular biosynthetic process | IEP | HCCA |
BP | GO:0042743 | hydrogen peroxide metabolic process | IEP | HCCA |
BP | GO:0043455 | regulation of secondary metabolic process | IEP | HCCA |
BP | GO:0044087 | regulation of cellular component biogenesis | IEP | HCCA |
BP | GO:0044550 | secondary metabolite biosynthetic process | IEP | HCCA |
BP | GO:0045828 | positive regulation of isoprenoid metabolic process | IEP | HCCA |
BP | GO:0045834 | positive regulation of lipid metabolic process | IEP | HCCA |
BP | GO:0045893 | positive regulation of DNA-templated transcription | IEP | HCCA |
BP | GO:0045935 | positive regulation of nucleobase-containing compound metabolic process | IEP | HCCA |
MF | GO:0046527 | glucosyltransferase activity | IEP | HCCA |
BP | GO:0046889 | positive regulation of lipid biosynthetic process | IEP | HCCA |
BP | GO:0046890 | regulation of lipid biosynthetic process | IEP | HCCA |
MF | GO:0047262 | polygalacturonate 4-alpha-galacturonosyltransferase activity | IEP | HCCA |
BP | GO:0048518 | positive regulation of biological process | IEP | HCCA |
BP | GO:0048522 | positive regulation of cellular process | IEP | HCCA |
BP | GO:0048856 | anatomical structure development | IEP | HCCA |
BP | GO:0050665 | hydrogen peroxide biosynthetic process | IEP | HCCA |
BP | GO:0050832 | defense response to fungus | IEP | HCCA |
BP | GO:0051173 | positive regulation of nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0051254 | positive regulation of RNA metabolic process | IEP | HCCA |
BP | GO:0051273 | beta-glucan metabolic process | IEP | HCCA |
BP | GO:0051274 | beta-glucan biosynthetic process | IEP | HCCA |
BP | GO:0052546 | cell wall pectin metabolic process | IEP | HCCA |
BP | GO:0062013 | positive regulation of small molecule metabolic process | IEP | HCCA |
BP | GO:0070646 | protein modification by small protein removal | IEP | HCCA |
BP | GO:0070647 | protein modification by small protein conjugation or removal | IEP | HCCA |
BP | GO:0072593 | reactive oxygen species metabolic process | IEP | HCCA |
BP | GO:1902680 | positive regulation of RNA biosynthetic process | IEP | HCCA |
BP | GO:1902930 | regulation of alcohol biosynthetic process | IEP | HCCA |
BP | GO:1902932 | positive regulation of alcohol biosynthetic process | IEP | HCCA |
BP | GO:1903338 | regulation of cell wall organization or biogenesis | IEP | HCCA |
BP | GO:1903409 | reactive oxygen species biosynthetic process | IEP | HCCA |
BP | GO:1903508 | positive regulation of nucleic acid-templated transcription | IEP | HCCA |
BP | GO:2000652 | regulation of secondary cell wall biogenesis | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR002495 | Glyco_trans_8 | 324 | 428 |
No external refs found! |