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AT3G18360


Description : VQ motif-containing protein


Gene families : OG0000540 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000540_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G18360

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00079p00122650 evm_27.TU.AmTr_v1... VQ motif-containing protein 8, chloroplastic... 0.02 OrthoFinder output from all 47 species
AMTR_s00183p00034990 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
Ala_g10970 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_01280 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_37589 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Pnu_g25337 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc03g119410.1.1 Solyc03g119410 no hits & (original description: none) 0.1 OrthoFinder output from all 47 species
Zm00001e002417_P001 Zm00001e002417 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
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Type GO Term Name Evidence Source
MF GO:0005337 nucleoside transmembrane transporter activity IEP HCCA
MF GO:0005372 water transmembrane transporter activity IEP HCCA
BP GO:0007568 aging IEP HCCA
BP GO:0009894 regulation of catabolic process IEP HCCA
MF GO:0015172 acidic amino acid transmembrane transporter activity IEP HCCA
MF GO:0015175 neutral L-amino acid transmembrane transporter activity IEP HCCA
MF GO:0015250 water channel activity IEP HCCA
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP HCCA
CC GO:0016459 myosin complex IEP HCCA
BP GO:0030036 actin cytoskeleton organization IEP HCCA
BP GO:0031329 regulation of cellular catabolic process IEP HCCA
BP GO:0051645 Golgi localization IEP HCCA
BP GO:0051646 mitochondrion localization IEP HCCA
BP GO:0060151 peroxisome localization IEP HCCA
BP GO:0060211 regulation of nuclear-transcribed mRNA poly(A) tail shortening IEP HCCA
BP GO:0061013 regulation of mRNA catabolic process IEP HCCA
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP HCCA
BP GO:1903311 regulation of mRNA metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR008889 VQ 78 101
No external refs found!