AT3G17950

Description : unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; Has 63 Blast hits to 63 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 63; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

Gene families : OG0001225 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001225_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT3G17950

Target	Alias	Description	ECC score	Gene Family Method
Aev_g14399	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Azfi_s0074.g037384	No alias	not classified & original description: CDS=63-944	0.05	OrthoFinder output from all 47 species
Ceric.02G039200.1	Ceric.02G039200	not classified & original description: pacid=50584117...	0.05	OrthoFinder output from all 47 species
Dac_g37678	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
LOC_Os01g62360.1	LOC_Os01g62360	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
LOC_Os06g14530.1	LOC_Os06g14530	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
Len_g57099	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
MA_194544g0010	No alias	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
Ore_g30210	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Pnu_g16915	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g21357	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	ND	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0008150	biological_process	ND	Interproscan
BP	GO:0009719	response to endogenous stimulus	None	Extended
BP	GO:0009725	response to hormone	None	Extended
BP	GO:0009741	response to brassinosteroid	RCA	Interproscan
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0014070	response to organic cyclic compound	None	Extended
BP	GO:0033993	response to lipid	None	Extended
BP	GO:0042221	response to chemical	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901700	response to oxygen-containing compound	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0005342	organic acid transmembrane transporter activity	IEP	HCCA
BP	GO:0006865	amino acid transport	IEP	HCCA
MF	GO:0015171	amino acid transmembrane transporter activity	IEP	HCCA
BP	GO:0015849	organic acid transport	IEP	HCCA
MF	GO:0046943	carboxylic acid transmembrane transporter activity	IEP	HCCA

No InterPro domains available for this sequence

External Links

No external refs found!

AT3G17950

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation