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  5. AT3G17580

AT3G17580


Description : unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G48330.1); Has 40 Blast hits to 40 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).


Gene families : OG0001805 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001805_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G17580

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00045p00134040 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
Aspi01Gene67442.t1 Aspi01Gene67442 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0143.g051462 No alias not classified & original description: CDS=430-780 0.04 OrthoFinder output from all 47 species
Cba_g77215 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.21G038800.1 Ceric.21G038800 not classified & original description: pacid=50604262... 0.06 OrthoFinder output from all 47 species
Ceric.31G023200.1 Ceric.31G023200 not classified & original description: pacid=50574593... 0.05 OrthoFinder output from all 47 species
Ehy_g22783 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os01g18450.1 LOC_Os01g18450 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os06g44870.1 LOC_Os06g44870 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Lfl_g30045 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005575 cellular_component ND Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
BP GO:0009410 response to xenobiotic stimulus IEP HCCA
BP GO:0009891 positive regulation of biosynthetic process IEP HCCA
BP GO:0009893 positive regulation of metabolic process IEP HCCA
BP GO:0010557 positive regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0010604 positive regulation of macromolecule metabolic process IEP HCCA
BP GO:0030968 endoplasmic reticulum unfolded protein response IEP HCCA
BP GO:0031325 positive regulation of cellular metabolic process IEP HCCA
BP GO:0031328 positive regulation of cellular biosynthetic process IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0034976 response to endoplasmic reticulum stress IEP HCCA
BP GO:0045893 positive regulation of DNA-templated transcription IEP HCCA
BP GO:0045935 positive regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0048518 positive regulation of biological process IEP HCCA
BP GO:0048522 positive regulation of cellular process IEP HCCA
BP GO:0051173 positive regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051254 positive regulation of RNA metabolic process IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:1902680 positive regulation of RNA biosynthetic process IEP HCCA
BP GO:1903508 positive regulation of nucleic acid-templated transcription IEP HCCA

No InterPro domains available for this sequence

No external refs found!