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  5. AT3G17540

AT3G17540


Description : F-box and associated interaction domains-containing protein


Gene families : OG0001907 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001907_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G17540
Cluster HCCA: Cluster_49

Target Alias Description ECC score Gene Family Method Actions
AT1G11620 No alias F-box and associated interaction domains-containing protein 0.14 OrthoFinder output from all 47 species
AT1G11810 No alias F-box associated ubiquitination effector family protein 0.06 OrthoFinder output from all 47 species
AT1G62270 No alias F-box and associated interaction domains-containing protein 0.15 OrthoFinder output from all 47 species
AT1G65990 No alias type 2 peroxiredoxin-related / thiol specific... 0.03 OrthoFinder output from all 47 species
AT1G67450 No alias F-box and associated interaction domains-containing protein 0.06 OrthoFinder output from all 47 species
AT1G77650 No alias F-box associated ubiquitination effector family protein 0.04 OrthoFinder output from all 47 species
AT2G11200 No alias F-box family protein 0.04 OrthoFinder output from all 47 species
AT2G38590 No alias F-box and associated interaction domains-containing protein 0.16 OrthoFinder output from all 47 species
AT2G39355 No alias No description available 0.06 OrthoFinder output from all 47 species
AT3G04250 No alias F-box associated ubiquitination effector family protein 0.05 OrthoFinder output from all 47 species
AT3G13680 No alias F-box and associated interaction domains-containing protein 0.12 OrthoFinder output from all 47 species
AT3G13830 No alias F-box and associated interaction domains-containing protein 0.06 OrthoFinder output from all 47 species
AT3G16020 No alias F-box associated ubiquitination effector protein 0.03 OrthoFinder output from all 47 species
AT3G16820 No alias F-box and associated interaction domains-containing protein 0.04 OrthoFinder output from all 47 species
AT3G17270 No alias F-box family protein 0.04 OrthoFinder output from all 47 species
AT3G17280 No alias F-box and associated interaction domains-containing protein 0.07 OrthoFinder output from all 47 species
AT3G17480 No alias F-box and associated interaction domains-containing protein 0.06 OrthoFinder output from all 47 species
AT3G17490 No alias F-box and associated interaction domains-containing protein 0.04 OrthoFinder output from all 47 species
AT3G17500 No alias F-box family protein 0.16 OrthoFinder output from all 47 species
AT3G17530 No alias F-box and associated interaction domains-containing protein 0.07 OrthoFinder output from all 47 species
AT3G18330 No alias F-box family protein 0.06 OrthoFinder output from all 47 species
AT3G19410 No alias F-box and associated interaction domains-containing protein 0.03 OrthoFinder output from all 47 species
AT3G19560 No alias F-box family protein 0.16 OrthoFinder output from all 47 species
AT3G19880 No alias F-box and associated interaction domains-containing protein 0.08 OrthoFinder output from all 47 species
AT3G19890 No alias F-box family protein 0.06 OrthoFinder output from all 47 species
AT3G20030 No alias F-box and associated interaction domains-containing protein 0.06 OrthoFinder output from all 47 species
AT3G20690 No alias F-box and associated interaction domains-containing protein 0.14 OrthoFinder output from all 47 species
AT3G20710 No alias F-box family protein 0.04 OrthoFinder output from all 47 species
AT3G21120 No alias F-box and associated interaction domains-containing protein 0.15 OrthoFinder output from all 47 species
AT3G22350 No alias F-box and associated interaction domains-containing protein 0.17 OrthoFinder output from all 47 species
AT3G22421 No alias F-box and associated interaction domains-containing protein 0.06 OrthoFinder output from all 47 species
AT3G22700 No alias F-box and associated interaction domains-containing protein 0.15 OrthoFinder output from all 47 species
AT3G22730 No alias F-box and associated interaction domains-containing protein 0.08 OrthoFinder output from all 47 species
AT3G22770 No alias F-box associated ubiquitination effector family protein 0.11 OrthoFinder output from all 47 species
AT3G22870 No alias F-box and associated interaction domains-containing protein 0.08 OrthoFinder output from all 47 species
AT3G23680 No alias F-box associated ubiquitination effector family protein 0.05 OrthoFinder output from all 47 species
AT3G24580 No alias F-box and associated interaction domains-containing protein 0.05 OrthoFinder output from all 47 species
AT3G25090 No alias F-box associated ubiquitination effector family protein 0.08 OrthoFinder output from all 47 species
AT3G49520 No alias F-box and associated interaction domains-containing protein 0.03 OrthoFinder output from all 47 species
AT4G10190 No alias F-box and associated interaction domains-containing protein 0.09 OrthoFinder output from all 47 species
AT4G10740 No alias F-box and associated interaction domains-containing protein 0.15 OrthoFinder output from all 47 species
AT4G17200 No alias F-box and associated interaction domains-containing protein 0.03 OrthoFinder output from all 47 species
AT5G36200 No alias F-box and associated interaction domains-containing protein 0.09 OrthoFinder output from all 47 species
AT5G36730 No alias F-box and associated interaction domains-containing protein 0.15 OrthoFinder output from all 47 species
AT5G36820 No alias F-box and associated interaction domains-containing protein 0.15 OrthoFinder output from all 47 species
AT5G41500 No alias F-box and associated interaction domains-containing protein 0.16 OrthoFinder output from all 47 species
AT5G41510 No alias F-box and associated interaction domains-containing protein 0.17 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005737 cytoplasm ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
MF GO:0003993 acid phosphatase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
InterPro domains Description Start Stop
IPR001810 F-box_dom 7 45
IPR006527 F-box-assoc_dom_typ1 206 371
No external refs found!