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AT3G17470 (ATCRSH, CRSH)


Aliases : ATCRSH, CRSH

Description : Ca2+-activated RelA/spot homolog


Gene families : OG0003616 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003616_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G17470

Target Alias Description ECC score Gene Family Method Actions
Aev_g20629 ATCRSH, CRSH ppGpp synthetase *(CRSH) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g08360 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g16932 ATCRSH, CRSH ppGpp synthetase *(CRSH) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.30G071200.1 Ceric.30G071200 not classified & original description: pacid=50608643... 0.03 OrthoFinder output from all 47 species
Gb_25655 ATCRSH, CRSH Probable GTP diphosphokinase CRSH, chloroplastic... 0.03 OrthoFinder output from all 47 species
MA_10430581g0010 ATCRSH, CRSH Probable GTP diphosphokinase CRSH, chloroplastic... 0.03 OrthoFinder output from all 47 species
Nbi_g10383 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g06700 ATCRSH, CRSH ppGpp synthetase *(CRSH) & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding ISS Interproscan
MF GO:0008728 GTP diphosphokinase activity IGI Interproscan
CC GO:0009507 chloroplast IDA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000373 Group II intron splicing IEP HCCA
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
MF GO:0004328 formamidase activity IEP HCCA
MF GO:0004345 glucose-6-phosphate dehydrogenase activity IEP HCCA
BP GO:0006006 glucose metabolic process IEP HCCA
BP GO:0006739 NADP metabolic process IEP HCCA
BP GO:0006740 NADPH regeneration IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0009051 pentose-phosphate shunt, oxidative branch IEP HCCA
BP GO:0009240 isopentenyl diphosphate biosynthetic process IEP HCCA
BP GO:0009627 systemic acquired resistance IEP HCCA
BP GO:0009637 response to blue light IEP HCCA
BP GO:0010155 regulation of proton transport IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP HCCA
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP HCCA
BP GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway IEP HCCA
BP GO:0019318 hexose metabolic process IEP HCCA
BP GO:0019362 pyridine nucleotide metabolic process IEP HCCA
BP GO:0019682 glyceraldehyde-3-phosphate metabolic process IEP HCCA
BP GO:0032879 regulation of localization IEP HCCA
BP GO:0034762 regulation of transmembrane transport IEP HCCA
BP GO:0034765 regulation of monoatomic ion transmembrane transport IEP HCCA
BP GO:0043269 regulation of monoatomic ion transport IEP HCCA
BP GO:0046490 isopentenyl diphosphate metabolic process IEP HCCA
BP GO:0046496 nicotinamide nucleotide metabolic process IEP HCCA
BP GO:0046777 protein autophosphorylation IEP HCCA
BP GO:0051049 regulation of transport IEP HCCA
BP GO:0051156 glucose 6-phosphate metabolic process IEP HCCA
BP GO:0072524 pyridine-containing compound metabolic process IEP HCCA
BP GO:1904062 regulation of monoatomic cation transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 477 532
IPR007685 RelA_SpoT 309 431
IPR003607 HD/PDEase_dom 105 242
No external refs found!