AT3G17280

Description : F-box and associated interaction domains-containing protein

Gene families : OG0001907 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001907_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT3G17280

Target	Alias	Description	ECC score	Gene Family Method
AT1G11620	No alias	F-box and associated interaction domains-containing protein	0.04	OrthoFinder output from all 47 species
AT1G27490	No alias	F-box and associated interaction domains-containing protein	0.04	OrthoFinder output from all 47 species
AT1G32140	No alias	F-box family protein	0.07	OrthoFinder output from all 47 species
AT1G54550	No alias	F-box and associated interaction domains-containing protein	0.04	OrthoFinder output from all 47 species
AT1G62270	No alias	F-box and associated interaction domains-containing protein	0.04	OrthoFinder output from all 47 species
AT1G65990	No alias	type 2 peroxiredoxin-related / thiol specific...	0.04	OrthoFinder output from all 47 species
AT1G66490	No alias	F-box and associated interaction domains-containing protein	0.07	OrthoFinder output from all 47 species
AT2G24510	No alias	F-box associated ubiquitination effector family protein	0.09	OrthoFinder output from all 47 species
AT2G33655	No alias	F-box and associated interaction domains-containing protein	0.06	OrthoFinder output from all 47 species
AT2G38590	No alias	F-box and associated interaction domains-containing protein	0.04	OrthoFinder output from all 47 species
AT2G39355	No alias	No description available	0.04	OrthoFinder output from all 47 species
AT3G03405	No alias	F-box associated ubiquitination effector family protein	0.07	OrthoFinder output from all 47 species
AT3G04250	No alias	F-box associated ubiquitination effector family protein	0.03	OrthoFinder output from all 47 species
AT3G13680	No alias	F-box and associated interaction domains-containing protein	0.06	OrthoFinder output from all 47 species
AT3G17320	No alias	F-box and associated interaction domains-containing protein	0.03	OrthoFinder output from all 47 species
AT3G17500	No alias	F-box family protein	0.04	OrthoFinder output from all 47 species
AT3G17530	No alias	F-box and associated interaction domains-containing protein	0.04	OrthoFinder output from all 47 species
AT3G17540	No alias	F-box and associated interaction domains-containing protein	0.07	OrthoFinder output from all 47 species
AT3G17560	No alias	F-box and associated interaction domains-containing protein	0.09	OrthoFinder output from all 47 species
AT3G17570	No alias	F-box and associated interaction domains-containing protein	0.06	OrthoFinder output from all 47 species
AT3G19470	No alias	F-box and associated interaction domains-containing protein	0.05	OrthoFinder output from all 47 species
AT3G19560	No alias	F-box family protein	0.05	OrthoFinder output from all 47 species
AT3G19880	No alias	F-box and associated interaction domains-containing protein	0.06	OrthoFinder output from all 47 species
AT3G20690	No alias	F-box and associated interaction domains-containing protein	0.04	OrthoFinder output from all 47 species
AT3G21120	No alias	F-box and associated interaction domains-containing protein	0.04	OrthoFinder output from all 47 species
AT3G22350	No alias	F-box and associated interaction domains-containing protein	0.05	OrthoFinder output from all 47 species
AT3G22700	No alias	F-box and associated interaction domains-containing protein	0.06	OrthoFinder output from all 47 species
AT3G22730	No alias	F-box and associated interaction domains-containing protein	0.05	OrthoFinder output from all 47 species
AT3G22770	No alias	F-box associated ubiquitination effector family protein	0.07	OrthoFinder output from all 47 species
AT3G22870	No alias	F-box and associated interaction domains-containing protein	0.07	OrthoFinder output from all 47 species
AT3G24580	No alias	F-box and associated interaction domains-containing protein	0.03	OrthoFinder output from all 47 species
AT3G49520	No alias	F-box and associated interaction domains-containing protein	0.03	OrthoFinder output from all 47 species
AT4G10190	No alias	F-box and associated interaction domains-containing protein	0.03	OrthoFinder output from all 47 species
AT4G10740	No alias	F-box and associated interaction domains-containing protein	0.04	OrthoFinder output from all 47 species
AT4G33290	No alias	F-box and associated interaction domains-containing protein	0.09	OrthoFinder output from all 47 species
AT5G36730	No alias	F-box and associated interaction domains-containing protein	0.05	OrthoFinder output from all 47 species
AT5G36820	No alias	F-box and associated interaction domains-containing protein	0.05	OrthoFinder output from all 47 species
AT5G41490	No alias	F-box associated ubiquitination effector family protein	0.05	OrthoFinder output from all 47 species
AT5G41500	No alias	F-box and associated interaction domains-containing protein	0.04	OrthoFinder output from all 47 species
AT5G41510	No alias	F-box and associated interaction domains-containing protein	0.04	OrthoFinder output from all 47 species
AT5G47300	No alias	F-box and associated interaction domains-containing protein	0.07	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	ND	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005737	cytoplasm	ISM	Interproscan
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006259	DNA metabolic process	None	Extended
BP	GO:0006310	DNA recombination	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006996	organelle organization	None	Extended
BP	GO:0007059	chromosome segregation	None	Extended
BP	GO:0007062	sister chromatid cohesion	RCA	Interproscan
BP	GO:0007131	reciprocal meiotic recombination	RCA	Interproscan
BP	GO:0008150	biological_process	ND	Interproscan
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0022402	cell cycle process	None	Extended
BP	GO:0022414	reproductive process	None	Extended
BP	GO:0033043	regulation of organelle organization	None	Extended
BP	GO:0033044	regulation of chromosome organization	RCA	Interproscan
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0035825	homologous recombination	None	Extended
BP	GO:0042138	meiotic DNA double-strand break formation	RCA	Interproscan
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0045132	meiotic chromosome segregation	RCA	Interproscan
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051128	regulation of cellular component organization	None	Extended
BP	GO:0051276	chromosome organization	None	Extended
BP	GO:0061982	meiosis I cell cycle process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
BP	GO:0090305	nucleic acid phosphodiester bond hydrolysis	None	Extended
BP	GO:0098813	nuclear chromosome segregation	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:0140527	reciprocal homologous recombination	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1903046	meiotic cell cycle process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000079	regulation of cyclin-dependent protein serine/threonine kinase activity	IEP	HCCA
BP	GO:0000278	mitotic cell cycle	IEP	HCCA
BP	GO:0001932	regulation of protein phosphorylation	IEP	HCCA
BP	GO:0001933	negative regulation of protein phosphorylation	IEP	HCCA
MF	GO:0004484	mRNA guanylyltransferase activity	IEP	HCCA
MF	GO:0005525	GTP binding	IEP	HCCA
BP	GO:0006260	DNA replication	IEP	HCCA
BP	GO:0006261	DNA-templated DNA replication	IEP	HCCA
BP	GO:0006370	7-methylguanosine mRNA capping	IEP	HCCA
BP	GO:0006397	mRNA processing	IEP	HCCA
BP	GO:0006469	negative regulation of protein kinase activity	IEP	HCCA
BP	GO:0006891	intra-Golgi vesicle-mediated transport	IEP	HCCA
BP	GO:0007049	cell cycle	IEP	HCCA
MF	GO:0008192	RNA guanylyltransferase activity	IEP	HCCA
BP	GO:0008284	positive regulation of cell population proliferation	IEP	HCCA
BP	GO:0009452	7-methylguanosine RNA capping	IEP	HCCA
BP	GO:0009744	response to sucrose	IEP	HCCA
BP	GO:0009888	tissue development	IEP	HCCA
BP	GO:0010087	phloem or xylem histogenesis	IEP	HCCA
BP	GO:0010089	xylem development	IEP	HCCA
BP	GO:0010440	stomatal lineage progression	IEP	HCCA
BP	GO:0010563	negative regulation of phosphorus metabolic process	IEP	HCCA
MF	GO:0016538	cyclin-dependent protein serine/threonine kinase regulator activity	IEP	HCCA
MF	GO:0016779	nucleotidyltransferase activity	IEP	HCCA
MF	GO:0019001	guanyl nucleotide binding	IEP	HCCA
MF	GO:0019207	kinase regulator activity	IEP	HCCA
BP	GO:0019220	regulation of phosphate metabolic process	IEP	HCCA
MF	GO:0019887	protein kinase regulator activity	IEP	HCCA
MF	GO:0030234	enzyme regulator activity	IEP	HCCA
BP	GO:0031324	negative regulation of cellular metabolic process	IEP	HCCA
BP	GO:0031399	regulation of protein modification process	IEP	HCCA
BP	GO:0031400	negative regulation of protein modification process	IEP	HCCA
MF	GO:0032561	guanyl ribonucleotide binding	IEP	HCCA
BP	GO:0033673	negative regulation of kinase activity	IEP	HCCA
BP	GO:0034285	response to disaccharide	IEP	HCCA
BP	GO:0036260	RNA capping	IEP	HCCA
BP	GO:0042023	DNA endoreduplication	IEP	HCCA
BP	GO:0042127	regulation of cell population proliferation	IEP	HCCA
BP	GO:0042325	regulation of phosphorylation	IEP	HCCA
BP	GO:0042326	negative regulation of phosphorylation	IEP	HCCA
BP	GO:0043086	negative regulation of catalytic activity	IEP	HCCA
BP	GO:0043549	regulation of kinase activity	IEP	HCCA
BP	GO:0044092	negative regulation of molecular function	IEP	HCCA
BP	GO:0044786	cell cycle DNA replication	IEP	HCCA
BP	GO:0045736	negative regulation of cyclin-dependent protein serine/threonine kinase activity	IEP	HCCA
BP	GO:0045786	negative regulation of cell cycle	IEP	HCCA
BP	GO:0045859	regulation of protein kinase activity	IEP	HCCA
BP	GO:0045936	negative regulation of phosphate metabolic process	IEP	HCCA
BP	GO:0050790	regulation of catalytic activity	IEP	HCCA
BP	GO:0051172	negative regulation of nitrogen compound metabolic process	IEP	HCCA
BP	GO:0051174	regulation of phosphorus metabolic process	IEP	HCCA
BP	GO:0051248	negative regulation of protein metabolic process	IEP	HCCA
BP	GO:0051338	regulation of transferase activity	IEP	HCCA
BP	GO:0051348	negative regulation of transferase activity	IEP	HCCA
BP	GO:0065009	regulation of molecular function	IEP	HCCA
MF	GO:0070568	guanylyltransferase activity	IEP	HCCA
BP	GO:0071900	regulation of protein serine/threonine kinase activity	IEP	HCCA
BP	GO:0071901	negative regulation of protein serine/threonine kinase activity	IEP	HCCA
MF	GO:0098772	molecular function regulator activity	IEP	HCCA
MF	GO:0140098	catalytic activity, acting on RNA	IEP	HCCA
BP	GO:1904029	regulation of cyclin-dependent protein kinase activity	IEP	HCCA
BP	GO:1904030	negative regulation of cyclin-dependent protein kinase activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001810	F-box_dom	3	47
IPR006527	F-box-assoc_dom_typ1	197	373

External Links

No external refs found!

AT3G17280

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation