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AT3G16170


Description : AMP-dependent synthetase and ligase family protein


Gene families : OG0002773 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002773_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G16170

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene60728.t1 Aspi01Gene60728 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc12g044290.2.1 Solyc12g044290 Malonate--CoA ligase OS=Arabidopsis thaliana... 0.08 OrthoFinder output from all 47 species
Solyc12g044300.2.1 Solyc12g044300 malonyl-CoA synthetase (mtMCS) 0.08 OrthoFinder output from all 47 species
Zm00001e019743_P005 Zm00001e019743 malonyl-CoA synthetase (mtMCS) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IDA Interproscan
CC GO:0005739 mitochondrion ISM Interproscan
CC GO:0005829 cytosol IDA Interproscan
CC GO:0016020 membrane IDA Interproscan
MF GO:0016208 AMP binding ISS Interproscan
MF GO:0090409 malonyl-CoA synthetase activity IDA Interproscan
BP GO:0090410 malonate catabolic process IMP Interproscan
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
InterPro domains Description Start Stop
IPR025110 AMP-bd_C 445 530
IPR000873 AMP-dep_Synth/Lig_com 11 435
No external refs found!