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  5. AT3G15840

AT3G15840 (PIFI)


Aliases : PIFI

Description : post-illumination chlorophyll fluorescence increase


Gene families : OG0008080 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008080_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G15840
Cluster HCCA: Cluster_54

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00104p00098970 PIFI,... No description available 0.03 OrthoFinder output from all 47 species
Ala_g31937 PIFI not classified & original description: none 0.07 OrthoFinder output from all 47 species
Als_g01558 PIFI not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g01632 PIFI not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0001.g000477 PIFI not classified & original description: CDS=273-1064 0.03 OrthoFinder output from all 47 species
Cba_g01806 PIFI not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.02G104100.1 PIFI, Ceric.02G104100 not classified & original description: pacid=50584792... 0.07 OrthoFinder output from all 47 species
Dac_g08630 PIFI not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01017340001 PIFI No description available 0.07 OrthoFinder output from all 47 species
LOC_Os03g38950.1 PIFI, LOC_Os03g38950 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Mp3g23110.1 PIFI no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g19672 PIFI not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g08562 PIFI not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g11222 PIFI not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g16426 PIFI not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0022.g008701 PIFI not classified & original description: CDS=204-1073 0.05 OrthoFinder output from all 47 species
Sam_g09988 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo127024 PIFI No description available 0.04 OrthoFinder output from all 47 species
Solyc12g042770.3.1 PIFI, Solyc12g042770 no hits & (original description: none) 0.1 OrthoFinder output from all 47 species
Spa_g07177 PIFI not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e004906_P001 PIFI, Zm00001e004906 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Zm00001e012478_P001 PIFI, Zm00001e012478 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0009507 chloroplast IDA Interproscan
CC GO:0009507 chloroplast ISM Interproscan
CC GO:0009570 chloroplast stroma IDA Interproscan
CC GO:0009579 thylakoid IDA Interproscan
BP GO:0010478 chlororespiration IMP Interproscan
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Type GO Term Name Evidence Source
BP GO:0000023 maltose metabolic process IEP HCCA
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0003849 3-deoxy-7-phosphoheptulonate synthase activity IEP HCCA
MF GO:0004176 ATP-dependent peptidase activity IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0005982 starch metabolic process IEP HCCA
BP GO:0005984 disaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006787 porphyrin-containing compound catabolic process IEP HCCA
CC GO:0008287 protein serine/threonine phosphatase complex IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
BP GO:0009423 chorismate biosynthetic process IEP HCCA
CC GO:0009528 plastid inner membrane IEP HCCA
CC GO:0009534 chloroplast thylakoid IEP HCCA
CC GO:0009706 chloroplast inner membrane IEP HCCA
BP GO:0009718 anthocyanin-containing compound biosynthetic process IEP HCCA
BP GO:0009767 photosynthetic electron transport chain IEP HCCA
BP GO:0009812 flavonoid metabolic process IEP HCCA
BP GO:0009813 flavonoid biosynthetic process IEP HCCA
BP GO:0010109 regulation of photosynthesis IEP HCCA
CC GO:0010287 plastoglobule IEP HCCA
BP GO:0015996 chlorophyll catabolic process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
BP GO:0016311 dephosphorylation IEP HCCA
BP GO:0019252 starch biosynthetic process IEP HCCA
CC GO:0031976 plastid thylakoid IEP HCCA
BP GO:0033015 tetrapyrrole catabolic process IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
CC GO:0042170 plastid membrane IEP HCCA
BP GO:0042440 pigment metabolic process IEP HCCA
BP GO:0043648 dicarboxylic acid metabolic process IEP HCCA
BP GO:0043650 dicarboxylic acid biosynthetic process IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
MF GO:0044183 protein folding chaperone IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
BP GO:0046148 pigment biosynthetic process IEP HCCA
BP GO:0046149 pigment catabolic process IEP HCCA
BP GO:0046283 anthocyanin-containing compound metabolic process IEP HCCA
BP GO:0046417 chorismate metabolic process IEP HCCA
BP GO:0061077 chaperone-mediated protein folding IEP HCCA
BP GO:0080005 photosystem stoichiometry adjustment IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
CC GO:1903293 phosphatase complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!