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  5. AT3G15240

AT3G15240


No description available


Gene families : OG0009105 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0009105_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G15240
Cluster HCCA: Cluster_111

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00094p00112650 evm_27.TU.AmTr_v1... Protein RICE SALT SENSITIVE 3 OS=Oryza sativa subsp. japonica 0.04 OrthoFinder output from all 47 species
AT5G53900 No alias Serine/threonine-protein kinase WNK (With No Lysine)-related 0.04 OrthoFinder output from all 47 species
Adi_g078778 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g37463 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g27621 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g40136 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g30231 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g43785 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0002.g001235 No alias not classified & original description: CDS=346-2175 0.04 OrthoFinder output from all 47 species
Ceric.19G034400.1 Ceric.19G034400 not classified & original description: pacid=50575541... 0.07 OrthoFinder output from all 47 species
Dcu_g32168 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os11g25920.1 LOC_Os11g25920 Protein RICE SALT SENSITIVE 3 OS=Oryza sativa subsp.... 0.07 OrthoFinder output from all 47 species
MA_136863g0010 No alias Protein RICE SALT SENSITIVE 3 OS=Oryza sativa subsp.... 0.05 OrthoFinder output from all 47 species
Msp_g29984 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g32569 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g38442 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e019565_P001 Zm00001e019565 Protein RICE SALT SENSITIVE 3 OS=Oryza sativa subsp.... 0.1 OrthoFinder output from all 47 species
Zm00001e028919_P001 Zm00001e028919 Protein RICE SALT SENSITIVE 3 OS=Oryza sativa subsp.... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport RCA Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0046685 response to arsenic-containing substance RCA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000323 lytic vacuole IEP HCCA
MF GO:0004871 obsolete signal transducer activity IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005615 extracellular space IEP HCCA
MF GO:0008083 growth factor activity IEP HCCA
MF GO:0008483 transaminase activity IEP HCCA
BP GO:0009606 tropism IEP HCCA
BP GO:0009629 response to gravity IEP HCCA
BP GO:0009630 gravitropism IEP HCCA
MF GO:0009672 auxin:proton symporter activity IEP HCCA
BP GO:0009828 plant-type cell wall loosening IEP HCCA
BP GO:0009831 plant-type cell wall modification involved in multidimensional cell growth IEP HCCA
BP GO:0009832 plant-type cell wall biogenesis IEP HCCA
BP GO:0009834 plant-type secondary cell wall biogenesis IEP HCCA
CC GO:0009925 basal plasma membrane IEP HCCA
BP GO:0009958 positive gravitropism IEP HCCA
MF GO:0010329 auxin efflux transmembrane transporter activity IEP HCCA
BP GO:0010453 regulation of cell fate commitment IEP HCCA
BP GO:0010455 positive regulation of cell fate commitment IEP HCCA
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP HCCA
MF GO:0030545 signaling receptor regulator activity IEP HCCA
MF GO:0030546 signaling receptor activator activity IEP HCCA
BP GO:0032880 regulation of protein localization IEP HCCA
BP GO:0042546 cell wall biogenesis IEP HCCA
BP GO:0042547 cell wall modification involved in multidimensional cell growth IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
BP GO:0045597 positive regulation of cell differentiation IEP HCCA
MF GO:0048018 receptor ligand activity IEP HCCA
BP GO:0048364 root development IEP HCCA
BP GO:0048829 root cap development IEP HCCA
BP GO:0060341 regulation of cellular localization IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071669 plant-type cell wall organization or biogenesis IEP HCCA
CC GO:0071944 cell periphery IEP HCCA
MF GO:0080161 auxin transmembrane transporter activity IEP HCCA
CC GO:0098590 plasma membrane region IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
BP GO:2000012 regulation of auxin polar transport IEP HCCA

No InterPro domains available for this sequence

No external refs found!