AT3G14880


Description : BEST Arabidopsis thaliana protein match is: transcription factor-related (TAIR:AT4G18650.1); Has 560 Blast hits to 560 proteins in 40 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 558; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).


Gene families : OG0001119 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001119_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G14880
Cluster HCCA: Cluster_107

Target Alias Description ECC score Gene Family Method Actions
AT4G18660 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.05 OrthoFinder output from all 47 species
AT4G18680 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.05 OrthoFinder output from all 47 species
Aev_g08962 No alias DOG-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os05g48650.1 LOC_Os05g48650 transcription factor (DOG) 0.03 OrthoFinder output from all 47 species
Lfl_g01120 No alias DOG-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g42218 No alias DOG-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g22337 GSQ5, DOG1, ATDOG1 DOG-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Solyc02g072570.2.1 GSQ5, DOG1,... transcription factor (DOG) 0.04 OrthoFinder output from all 47 species
Solyc03g006120.4.1 Solyc03g006120 transcription factor (DOG) 0.04 OrthoFinder output from all 47 species
Solyc07g062380.1.1 Solyc07g062380 transcription factor (DOG) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
BP GO:0080167 response to karrikin IEP Interproscan
Type GO Term Name Evidence Source
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006935 chemotaxis IEP HCCA
BP GO:0007275 multicellular organism development IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
BP GO:0009409 response to cold IEP HCCA
BP GO:0009553 embryo sac development IEP HCCA
BP GO:0009555 pollen development IEP HCCA
BP GO:0009845 seed germination IEP HCCA
BP GO:0010183 pollen tube guidance IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0019915 lipid storage IEP HCCA
BP GO:0032501 multicellular organismal process IEP HCCA
BP GO:0040011 locomotion IEP HCCA
BP GO:0042330 taxis IEP HCCA
BP GO:0048229 gametophyte development IEP HCCA
BP GO:0048443 stamen development IEP HCCA
BP GO:0048825 cotyledon development IEP HCCA
BP GO:0048827 phyllome development IEP HCCA
BP GO:0050826 response to freezing IEP HCCA
BP GO:0050918 positive chemotaxis IEP HCCA
BP GO:0051235 maintenance of location IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
BP GO:0099402 plant organ development IEP HCCA
InterPro domains Description Start Stop
IPR025422 TGA_domain 24 105
No external refs found!