AT3G14550 (GGPS3)

Aliases : GGPS3

Description : geranylgeranyl pyrophosphate synthase 3

Gene families : OG0001174 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001174_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT3G14550

Target	Alias	Description	ECC score	Gene Family Method
AT2G18620	No alias	Terpenoid synthases superfamily protein	0.05	OrthoFinder output from all 47 species
Aev_g17196	GGPS3	EC_2.5 transferase transferring alkyl or aryl group,...	0.02	OrthoFinder output from all 47 species
Aop_g14662	GGPS1	EC_2.5 transferase transferring alkyl or aryl group,...	0.03	OrthoFinder output from all 47 species
Azfi_s0005.g009109	GGPS1	not classified & original description: CDS=1-594	0.07	OrthoFinder output from all 47 species
Dac_g17913	GGPS1	EC_2.5 transferase transferring alkyl or aryl group,...	0.03	OrthoFinder output from all 47 species
Gb_33246	No alias	isoprenyl diphosphate synthase	0.03	OrthoFinder output from all 47 species
Lfl_g13318	GGPS4	EC_2.5 transferase transferring alkyl or aryl group,...	0.02	OrthoFinder output from all 47 species
MA_543467g0010	No alias	isoprenyl diphosphate synthase	0.02	OrthoFinder output from all 47 species
Pir_g57960	GGPS1	EC_2.5 transferase transferring alkyl or aryl group,...	0.04	OrthoFinder output from all 47 species
Solyc11g011240.1.1	GGPS1, Solyc11g011240	isoprenyl diphosphate synthase	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004311	farnesyltranstransferase activity	IDA	Interproscan
MF	GO:0004659	prenyltransferase activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006629	lipid metabolic process	None	Extended
BP	GO:0006720	isoprenoid metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008299	isoprenoid biosynthetic process	ISS	Interproscan
BP	GO:0008299	isoprenoid biosynthetic process	TAS	Interproscan
BP	GO:0008610	lipid biosynthetic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
CC	GO:0009507	chloroplast	IDA	Interproscan
CC	GO:0009513	etioplast	IDA	Interproscan
CC	GO:0009536	plastid	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016765	transferase activity, transferring alkyl or aryl (other than methyl) groups	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044255	cellular lipid metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR000092	Polyprenyl_synt	93	330

External Links

No external refs found!

AT3G14550 (GGPS3)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation