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  5. AT3G13680

AT3G13680


Description : F-box and associated interaction domains-containing protein


Gene families : OG0001907 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001907_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G13680

Target Alias Description ECC score Gene Family Method Actions
AT1G11620 No alias F-box and associated interaction domains-containing protein 0.08 OrthoFinder output from all 47 species
AT1G11810 No alias F-box associated ubiquitination effector family protein 0.04 OrthoFinder output from all 47 species
AT1G24800 No alias F-box family protein 0.06 OrthoFinder output from all 47 species
AT1G24881 No alias F-box family protein 0.06 OrthoFinder output from all 47 species
AT1G25055 No alias F-box family protein 0.06 OrthoFinder output from all 47 species
AT1G25150 No alias F-box family protein 0.06 OrthoFinder output from all 47 species
AT1G27490 No alias F-box and associated interaction domains-containing protein 0.18 OrthoFinder output from all 47 species
AT1G32140 No alias F-box family protein 0.12 OrthoFinder output from all 47 species
AT1G54550 No alias F-box and associated interaction domains-containing protein 0.1 OrthoFinder output from all 47 species
AT1G62270 No alias F-box and associated interaction domains-containing protein 0.07 OrthoFinder output from all 47 species
AT1G66490 No alias F-box and associated interaction domains-containing protein 0.1 OrthoFinder output from all 47 species
AT1G67450 No alias F-box and associated interaction domains-containing protein 0.03 OrthoFinder output from all 47 species
AT2G24510 No alias F-box associated ubiquitination effector family protein 0.09 OrthoFinder output from all 47 species
AT2G33655 No alias F-box and associated interaction domains-containing protein 0.06 OrthoFinder output from all 47 species
AT2G39355 No alias No description available 0.2 OrthoFinder output from all 47 species
AT3G03405 No alias F-box associated ubiquitination effector family protein 0.14 OrthoFinder output from all 47 species
AT3G04250 No alias F-box associated ubiquitination effector family protein 0.08 OrthoFinder output from all 47 species
AT3G13830 No alias F-box and associated interaction domains-containing protein 0.06 OrthoFinder output from all 47 species
AT3G16020 No alias F-box associated ubiquitination effector protein 0.08 OrthoFinder output from all 47 species
AT3G16820 No alias F-box and associated interaction domains-containing protein 0.02 OrthoFinder output from all 47 species
AT3G17265 No alias F-box and associated interaction domains-containing protein 0.05 OrthoFinder output from all 47 species
AT3G17280 No alias F-box and associated interaction domains-containing protein 0.06 OrthoFinder output from all 47 species
AT3G17480 No alias F-box and associated interaction domains-containing protein 0.05 OrthoFinder output from all 47 species
AT3G17500 No alias F-box family protein 0.07 OrthoFinder output from all 47 species
AT3G17540 No alias F-box and associated interaction domains-containing protein 0.12 OrthoFinder output from all 47 species
AT3G17560 No alias F-box and associated interaction domains-containing protein 0.13 OrthoFinder output from all 47 species
AT3G17570 No alias F-box and associated interaction domains-containing protein 0.11 OrthoFinder output from all 47 species
AT3G17620 No alias F-box and associated interaction domains-containing protein 0.04 OrthoFinder output from all 47 species
AT3G18330 No alias F-box family protein 0.04 OrthoFinder output from all 47 species
AT3G19410 No alias F-box and associated interaction domains-containing protein 0.08 OrthoFinder output from all 47 species
AT3G19470 No alias F-box and associated interaction domains-containing protein 0.08 OrthoFinder output from all 47 species
AT3G19560 No alias F-box family protein 0.11 OrthoFinder output from all 47 species
AT3G19880 No alias F-box and associated interaction domains-containing protein 0.06 OrthoFinder output from all 47 species
AT3G19890 No alias F-box family protein 0.04 OrthoFinder output from all 47 species
AT3G20030 No alias F-box and associated interaction domains-containing protein 0.05 OrthoFinder output from all 47 species
AT3G22350 No alias F-box and associated interaction domains-containing protein 0.09 OrthoFinder output from all 47 species
AT3G22421 No alias F-box and associated interaction domains-containing protein 0.03 OrthoFinder output from all 47 species
AT3G22720 No alias F-box and associated interaction domains-containing protein 0.04 OrthoFinder output from all 47 species
AT3G22730 No alias F-box and associated interaction domains-containing protein 0.04 OrthoFinder output from all 47 species
AT3G22770 No alias F-box associated ubiquitination effector family protein 0.33 OrthoFinder output from all 47 species
AT3G22870 No alias F-box and associated interaction domains-containing protein 0.07 OrthoFinder output from all 47 species
AT3G23680 No alias F-box associated ubiquitination effector family protein 0.11 OrthoFinder output from all 47 species
AT3G24580 No alias F-box and associated interaction domains-containing protein 0.07 OrthoFinder output from all 47 species
AT3G25090 No alias F-box associated ubiquitination effector family protein 0.04 OrthoFinder output from all 47 species
AT3G44120 No alias F-box and associated interaction domains-containing protein 0.14 OrthoFinder output from all 47 species
AT3G49520 No alias F-box and associated interaction domains-containing protein 0.07 OrthoFinder output from all 47 species
AT4G09870 No alias F-box and associated interaction domains-containing protein 0.09 OrthoFinder output from all 47 species
AT4G10190 No alias F-box and associated interaction domains-containing protein 0.07 OrthoFinder output from all 47 species
AT4G10740 No alias F-box and associated interaction domains-containing protein 0.07 OrthoFinder output from all 47 species
AT4G17200 No alias F-box and associated interaction domains-containing protein 0.03 OrthoFinder output from all 47 species
AT4G33290 No alias F-box and associated interaction domains-containing protein 0.17 OrthoFinder output from all 47 species
AT5G36200 No alias F-box and associated interaction domains-containing protein 0.07 OrthoFinder output from all 47 species
AT5G36730 No alias F-box and associated interaction domains-containing protein 0.1 OrthoFinder output from all 47 species
AT5G36820 No alias F-box and associated interaction domains-containing protein 0.1 OrthoFinder output from all 47 species
AT5G41490 No alias F-box associated ubiquitination effector family protein 0.11 OrthoFinder output from all 47 species
AT5G41500 No alias F-box and associated interaction domains-containing protein 0.06 OrthoFinder output from all 47 species
AT5G47300 No alias F-box and associated interaction domains-containing protein 0.12 OrthoFinder output from all 47 species
AT5G62830 No alias F-box associated ubiquitination effector family protein 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005737 cytoplasm ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
InterPro domains Description Start Stop
IPR001810 F-box_dom 5 41
IPR006527 F-box-assoc_dom_typ1 198 379
No external refs found!