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  5. AT3G11980

AT3G11980 (MS2, FAR2)


Aliases : MS2, FAR2

Description : Jojoba acyl CoA reductase-related male sterility protein


Gene families : OG0000749 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000749_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G11980

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00040p00161230 FAR4,... Cell wall.cutin and suberin.cuticular lipid... 0.02 OrthoFinder output from all 47 species
AMTR_s00133p00107670 MS2, FAR2,... Cell wall.cutin and suberin.cuticular lipid... 0.13 OrthoFinder output from all 47 species
AT3G44540 FAR4 fatty acid reductase 4 0.06 OrthoFinder output from all 47 species
AT3G44550 FAR5 fatty acid reductase 5 0.04 OrthoFinder output from all 47 species
AT3G44560 FAR8 fatty acid reductase 8 0.04 OrthoFinder output from all 47 species
AT5G22420 FAR7 fatty acid reductase 7 0.04 OrthoFinder output from all 47 species
Adi_g108122 MS2, FAR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g108123 MS2, FAR2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g48361 MS2, FAR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0003.g007737 MS2, FAR2 not classified & original description: CDS=193-2040 0.03 OrthoFinder output from all 47 species
Cba_g19481 MS2, FAR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g29675 MS2, FAR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.13G009800.1 MS2, FAR2,... not classified & original description: pacid=50635537... 0.11 OrthoFinder output from all 47 species
Dcu_g09261 MS2, FAR2 not classified & original description: none 0.08 OrthoFinder output from all 47 species
GSVIVT01013562001 MS2, FAR2 Fatty acyl-CoA reductase 2 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01033433001 MS2, FAR2 Cell wall.cutin and suberin.cuticular lipid... 0.11 OrthoFinder output from all 47 species
Gb_08789 FAR4 acyl CoA reductase 0.02 OrthoFinder output from all 47 species
Gb_18690 MS2, FAR2 fatty acyl-CoA reductase (MS2). acyl CoA reductase 0.07 OrthoFinder output from all 47 species
Gb_33594 G7, CER4, FAR3 acyl CoA reductase 0.04 OrthoFinder output from all 47 species
Gb_38743 FAR5 acyl CoA reductase 0.04 OrthoFinder output from all 47 species
LOC_Os03g07140.1 MS2, FAR2, LOC_Os03g07140 fatty acyl-CoA reductase (MS2). acyl CoA reductase 0.13 OrthoFinder output from all 47 species
LOC_Os04g28520.1 FAR1, LOC_Os04g28520 acyl CoA reductase 0.04 OrthoFinder output from all 47 species
LOC_Os04g28620.1 FAR1, LOC_Os04g28620 acyl CoA reductase 0.04 OrthoFinder output from all 47 species
LOC_Os07g23340.1 FAR1, LOC_Os07g23340 Fatty acyl-CoA reductase 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os07g23380.1 LOC_Os07g23380 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g23229 MS2, FAR2 not classified & original description: none 0.01 OrthoFinder output from all 47 species
MA_10122399g0010 FAR4 acyl CoA reductase 0.04 OrthoFinder output from all 47 species
MA_101858g0010 MS2, FAR2 Fatty acyl-CoA reductase 2 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
MA_10428856g0010 G7, CER4, FAR3 Probable fatty acyl-CoA reductase 4 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_10430156g0010 MS2, FAR2 acyl CoA reductase 0.02 OrthoFinder output from all 47 species
MA_10431907g0010 G7, CER4, FAR3 acyl CoA reductase 0.05 OrthoFinder output from all 47 species
MA_10433039g0030 FAR4 Probable fatty acyl-CoA reductase 4 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
MA_125473g0010 MS2, FAR2 Fatty acyl-CoA reductase 2 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_182956g0010 MS2, FAR2 acyl CoA reductase 0.02 OrthoFinder output from all 47 species
MA_428306g0010 MS2, FAR2 acyl CoA reductase 0.05 OrthoFinder output from all 47 species
MA_438940g0010 G7, CER4, FAR3 Probable fatty acyl-CoA reductase 4 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_55232g0010 MS2, FAR2 acyl CoA reductase 0.02 OrthoFinder output from all 47 species
MA_6802614g0010 MS2, FAR2 Fatty acyl-CoA reductase 2 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_95531g0010 MS2, FAR2 acyl CoA reductase 0.03 OrthoFinder output from all 47 species
MA_9850928g0010 MS2, FAR2 Fatty acyl-CoA reductase 2 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Nbi_g35169 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g35170 FAR6 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g42363 MS2, FAR2 not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ore_g42364 MS2, FAR2 not classified & original description: none 0.08 OrthoFinder output from all 47 species
Pir_g26243 G7, CER4, FAR3 fatty acyl CoA reductase *(FAR) & original description: none 0.01 OrthoFinder output from all 47 species
Ppi_g10289 MS2, FAR2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Smo270198 MS2, FAR2 Cell wall.cutin and suberin.cuticular lipid... 0.03 OrthoFinder output from all 47 species
Solyc01g104200.4.1 FAR1, Solyc01g104200 acyl CoA reductase 0.04 OrthoFinder output from all 47 species
Solyc03g051960.4.1 MS2, FAR2, Solyc03g051960 fatty acyl-CoA reductase (MS2). acyl CoA reductase 0.15 OrthoFinder output from all 47 species
Solyc06g074390.3.1 G7, CER4, FAR3,... acyl CoA reductase 0.03 OrthoFinder output from all 47 species
Solyc06g074410.4.1 FAR4, Solyc06g074410 acyl CoA reductase 0.04 OrthoFinder output from all 47 species
Solyc09g005940.4.1 MS2, FAR2, Solyc09g005940 acyl CoA reductase 0.03 OrthoFinder output from all 47 species
Solyc09g009565.1.1 MS2, FAR2, Solyc09g009565 Fatty acyl-CoA reductase 2 OS=Arabidopsis thaliana... 0.07 OrthoFinder output from all 47 species
Solyc09g009580.4.1 MS2, FAR2, Solyc09g009580 acyl CoA reductase 0.11 OrthoFinder output from all 47 species
Solyc11g067170.3.1 FAR1, Solyc11g067170 acyl CoA reductase 0.06 OrthoFinder output from all 47 species
Solyc11g067180.2.1 G7, CER4, FAR3,... acyl CoA reductase 0.04 OrthoFinder output from all 47 species
Solyc11g067190.3.1 G7, CER4, FAR3,... acyl CoA reductase 0.03 OrthoFinder output from all 47 species
Zm00001e022068_P003 FAR1, Zm00001e022068 acyl CoA reductase 0.05 OrthoFinder output from all 47 species
Zm00001e024547_P004 FAR1, Zm00001e024547 acyl CoA reductase 0.04 OrthoFinder output from all 47 species
Zm00001e033615_P003 FAR1, Zm00001e033615 acyl CoA reductase 0.01 OrthoFinder output from all 47 species
Zm00001e038924_P001 MS2, FAR2, Zm00001e038924 acyl CoA reductase 0.11 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0009556 microsporogenesis IMP Interproscan
BP GO:0010584 pollen exine formation IMP Interproscan
BP GO:0010584 pollen exine formation RCA Interproscan
MF GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor ISS Interproscan
MF GO:0080019 fatty-acyl-CoA reductase (alcohol-forming) activity IDA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005244 voltage-gated monoatomic ion channel activity IEP HCCA
MF GO:0005249 voltage-gated potassium channel activity IEP HCCA
MF GO:0005267 potassium channel activity IEP HCCA
MF GO:0005319 lipid transporter activity IEP HCCA
MF GO:0005345 purine nucleobase transmembrane transporter activity IEP HCCA
MF GO:0005372 water transmembrane transporter activity IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005788 endoplasmic reticulum lumen IEP HCCA
BP GO:0006863 purine nucleobase transport IEP HCCA
MF GO:0015205 nucleobase transmembrane transporter activity IEP HCCA
MF GO:0015250 water channel activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0015271 outward rectifier potassium channel activity IEP HCCA
BP GO:0015851 nucleobase transport IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP HCCA
MF GO:0016713 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced iron-sulfur protein as one donor, and incorporation of one atom of oxygen IEP HCCA
MF GO:0016837 carbon-oxygen lyase activity, acting on polysaccharides IEP HCCA
MF GO:0018685 alkane 1-monooxygenase activity IEP HCCA
MF GO:0019825 oxygen binding IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022832 voltage-gated channel activity IEP HCCA
MF GO:0022843 voltage-gated monoatomic cation channel activity IEP HCCA
MF GO:0030570 pectate lyase activity IEP HCCA
BP GO:0030638 polyketide metabolic process IEP HCCA
BP GO:0030639 polyketide biosynthetic process IEP HCCA
BP GO:0035445 borate transmembrane transport IEP HCCA
BP GO:0046713 borate transport IEP HCCA
MF GO:0046715 active borate transmembrane transporter activity IEP HCCA
BP GO:0048235 pollen sperm cell differentiation IEP HCCA
BP GO:0051791 medium-chain fatty acid metabolic process IEP HCCA
BP GO:0051792 medium-chain fatty acid biosynthetic process IEP HCCA
BP GO:0080110 sporopollenin biosynthetic process IEP HCCA
MF GO:0090439 tetraketide alpha-pyrone synthase activity IEP HCCA
BP GO:1900150 regulation of defense response to fungus IEP HCCA
InterPro domains Description Start Stop
IPR033640 FAR_C 542 613
IPR013120 Far_NAD-bd 135 437
No external refs found!