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  5. AT3G11730

AT3G11730 (ATFP8, RABD1, ATRABD1)


Aliases : ATFP8, RABD1, ATRABD1

Description : Ras-related small GTP-binding family protein


Gene families : OG0001129 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001129_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G11730

Target Alias Description ECC score Gene Family Method Actions
Als_g42380 RAB1C, ATRAB1C, ATRABD2C D-class RAB GTPase & original description: none 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001408.10 RAB1C, ATRAB1C, ATRABD2C Vesicle trafficking.regulation of membrane tethering and... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IDA Interproscan
MF GO:0005515 protein binding IPI Interproscan
MF GO:0005525 GTP binding ISS Interproscan
CC GO:0005794 Golgi apparatus ISM Interproscan
CC GO:0005886 plasma membrane IDA Interproscan
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IMP Interproscan
MF GO:0030742 GTP-dependent protein binding IPI Interproscan
CC GO:0032588 trans-Golgi network membrane IDA Interproscan
MF GO:0080115 myosin XI tail binding IPI Interproscan
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Type GO Term Name Evidence Source
BP GO:0000226 microtubule cytoskeleton organization IEP HCCA
BP GO:0000913 preprophase band assembly IEP HCCA
CC GO:0005856 cytoskeleton IEP HCCA
CC GO:0005938 cell cortex IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006310 DNA recombination IEP HCCA
BP GO:0006312 mitotic recombination IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0009560 embryo sac egg cell differentiation IEP HCCA
CC GO:0009574 preprophase band IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
BP GO:0022412 cellular process involved in reproduction in multicellular organism IEP HCCA
BP GO:0030154 cell differentiation IEP HCCA
CC GO:0030863 cortical cytoskeleton IEP HCCA
BP GO:0030865 cortical cytoskeleton organization IEP HCCA
CC GO:0030981 cortical microtubule cytoskeleton IEP HCCA
InterPro domains Description Start Stop
IPR001806 Small_GTPase 10 170
No external refs found!