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  5. AT3G11600

AT3G11600


Description : unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to karrikin; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G06270.1); Has 171 Blast hits to 171 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 171; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).


Gene families : OG0001529 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001529_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G11600
Cluster HCCA: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
AT3G52561 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.04 OrthoFinder output from all 47 species
Als_g46839 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g29676 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene51159.t1 Aspi01Gene51159 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0019.g015061 No alias not classified & original description: CDS=1-939 0.03 OrthoFinder output from all 47 species
Azfi_s0272.g061239 No alias not classified & original description: CDS=73-1257 0.03 OrthoFinder output from all 47 species
Dcu_g48360 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os04g58790.1 LOC_Os04g58790 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os05g37030.1 LOC_Os05g37030 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g04637 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0033.g011000 No alias not classified & original description: CDS=157-1332 0.03 OrthoFinder output from all 47 species
Spa_g30856 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g41296 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0080167 response to karrikin IEP Interproscan
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Type GO Term Name Evidence Source
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0005102 signaling receptor binding IEP HCCA
BP GO:0006694 steroid biosynthetic process IEP HCCA
BP GO:0008202 steroid metabolic process IEP HCCA
BP GO:0009888 tissue development IEP HCCA
BP GO:0010052 guard cell differentiation IEP HCCA
BP GO:0010268 brassinosteroid homeostasis IEP HCCA
BP GO:0010374 stomatal complex development IEP HCCA
BP GO:0016128 phytosteroid metabolic process IEP HCCA
BP GO:0016129 phytosteroid biosynthetic process IEP HCCA
BP GO:0016131 brassinosteroid metabolic process IEP HCCA
BP GO:0016132 brassinosteroid biosynthetic process IEP HCCA
MF GO:0019825 oxygen binding IEP HCCA
BP GO:0048878 chemical homeostasis IEP HCCA
BP GO:0055088 lipid homeostasis IEP HCCA
BP GO:0090558 plant epidermis development IEP HCCA
BP GO:0090627 plant epidermal cell differentiation IEP HCCA

No InterPro domains available for this sequence

No external refs found!