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  5. AT3G10240

AT3G10240


Description : F-box and associated interaction domains-containing protein


Gene families : OG0001988 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001988_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G10240
Cluster HCCA: Cluster_31

Target Alias Description ECC score Gene Family Method Actions
AT1G23037 No alias F-box associated ubiquitination effector family protein 0.06 OrthoFinder output from all 47 species
AT1G30790 No alias F-box and associated interaction domains-containing protein 0.05 OrthoFinder output from all 47 species
AT1G30925 No alias phospholipase Cs 0.05 OrthoFinder output from all 47 species
AT1G31090 No alias F-box family protein 0.03 OrthoFinder output from all 47 species
AT1G31163 No alias F-box associated ubiquitination effector family protein 0.06 OrthoFinder output from all 47 species
AT1G31620 No alias unknown protein; Has 9 Blast hits to 9 proteins in 2... 0.04 OrthoFinder output from all 47 species
AT1G32660 No alias F-box and associated interaction domains-containing protein 0.04 OrthoFinder output from all 47 species
AT1G33010 No alias F-box and associated interaction domains-containing protein 0.06 OrthoFinder output from all 47 species
AT1G46840 No alias F-box family protein 0.04 OrthoFinder output from all 47 species
AT1G46912 No alias F-box associated ubiquitination effector family protein 0.02 OrthoFinder output from all 47 species
AT1G47350 No alias F-box associated ubiquitination effector family protein 0.03 OrthoFinder output from all 47 species
AT1G47730 No alias F-box and associated interaction domains-containing protein 0.03 OrthoFinder output from all 47 species
AT1G50880 No alias F-box and associated interaction domains-containing protein 0.06 OrthoFinder output from all 47 species
AT1G53360 No alias F-box associated ubiquitination effector family protein 0.05 OrthoFinder output from all 47 species
AT1G53370 No alias F-box and associated interaction domains-containing protein 0.11 OrthoFinder output from all 47 species
AT1G53815 No alias F-box family protein 0.08 OrthoFinder output from all 47 species
AT1G60370 No alias F-box and associated interaction domains-containing protein 0.06 OrthoFinder output from all 47 species
AT1G61060 No alias F-box family protein 0.03 OrthoFinder output from all 47 species
AT1G67130 No alias F-box family protein 0.03 OrthoFinder output from all 47 species
AT2G02890 No alias F-box family protein 0.11 OrthoFinder output from all 47 species
AT2G13630 No alias F-box associated ubiquitination effector family protein 0.02 OrthoFinder output from all 47 species
AT2G16220 No alias F-box and associated interaction domains-containing protein 0.03 OrthoFinder output from all 47 species
AT2G16450 No alias F-box and associated interaction domains-containing protein 0.05 OrthoFinder output from all 47 species
AT2G16810 No alias F-box and associated interaction domains-containing protein 0.09 OrthoFinder output from all 47 species
AT2G21930 No alias F-box associated ubiquitination effector family protein 0.05 OrthoFinder output from all 47 species
AT2G23160 No alias F-box family protein 0.03 OrthoFinder output from all 47 species
AT2G31470 DOR F-box and associated interaction domains-containing protein 0.03 OrthoFinder output from all 47 species
AT2G32470 No alias F-box associated ubiquitination effector family protein 0.06 OrthoFinder output from all 47 species
AT2G40910 No alias F-box and associated interaction domains-containing protein 0.07 OrthoFinder output from all 47 species
AT3G04660 No alias F-box and associated interaction domains-containing protein 0.04 OrthoFinder output from all 47 species
AT3G49440 No alias F-box associated ubiquitination effector family protein 0.08 OrthoFinder output from all 47 species
AT3G52320 No alias F-box and associated interaction domains-containing protein 0.03 OrthoFinder output from all 47 species
AT3G57580 No alias F-box and associated interaction domains-containing protein 0.06 OrthoFinder output from all 47 species
AT4G29970 No alias F-box and associated interaction domains-containing protein 0.09 OrthoFinder output from all 47 species
AT4G38870 No alias F-box and associated interaction domains-containing protein 0.03 OrthoFinder output from all 47 species
AT5G22791 No alias F-box family protein 0.03 OrthoFinder output from all 47 species
AT5G42430 No alias F-box and associated interaction domains-containing protein 0.05 OrthoFinder output from all 47 species
AT5G50220 No alias F-box family protein 0.07 OrthoFinder output from all 47 species
AT5G52610 No alias F-box and associated interaction domains-containing protein 0.03 OrthoFinder output from all 47 species
AT5G52620 No alias F-box associated ubiquitination effector family protein 0.05 OrthoFinder output from all 47 species
AT5G62060 No alias F-box and associated interaction domains-containing protein 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP HCCA
CC GO:0031461 cullin-RING ubiquitin ligase complex IEP HCCA
CC GO:0080008 Cul4-RING E3 ubiquitin ligase complex IEP HCCA
InterPro domains Description Start Stop
IPR001810 F-box_dom 25 61
IPR013187 F-box-assoc_dom_typ3 220 339
No external refs found!