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AT3G09480


Description : Histone superfamily protein


Gene families : OG0000176 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000176_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G09480

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00085p00145460 evm_27.TU.AmTr_v1... Chromatin organisation.histones.H2B-type histone 0.04 OrthoFinder output from all 47 species
Adi_g015166 No alias histone *(H2B) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g068717 No alias histone *(H2B) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g34176 HTB4 histone *(H2B) & original description: none 0.04 OrthoFinder output from all 47 species
Als_g06780 No alias histone *(H2B) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g05441 No alias histone *(H2B) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene58547.t1 HTB4, Aspi01Gene58547 histone *(H2B) & original description: none 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000944.18 No alias Chromatin organisation.histones.H2B-type histone 0.01 OrthoFinder output from all 47 species
Dcu_g51857 No alias histone *(H2B) & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os01g05900.1 HTB11, LOC_Os01g05900 histone (H2B) 0.03 OrthoFinder output from all 47 species
LOC_Os01g06010.1 HTB11, LOC_Os01g06010 histone (H2B) 0.02 OrthoFinder output from all 47 species
Msp_g05772 No alias histone *(H2B) & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g28099 No alias histone *(H2B) & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g20788 HTB4 histone *(H2B) & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g29793 HTB11 histone *(H2B) & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g06628 No alias histone *(H2B) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g37867 No alias histone *(H2B) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc03g071620.2.1 Solyc03g071620 histone (H2B) 0.05 OrthoFinder output from all 47 species
Solyc05g055440.1.1 HTB11, Solyc05g055440 histone (H2B) 0.06 OrthoFinder output from all 47 species
Spa_g10968 No alias histone *(H2B) & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g39909 HTB4 histone *(H2B) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g46425 No alias histone *(H2B) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e020484_P002 HTB1, Zm00001e020484 histone (H2B) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding ISS Interproscan
CC GO:0005634 nucleus ISM Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR007125 Histone_H2A/H2B/H3 4 102
No external refs found!