AT3G08660

Description : Phototropic-responsive NPH3 family protein

Gene families : OG0000584 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000584_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT3G08660

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00005p00262560	evm_27.TU.AmTr_v1...	BTB/POZ domain-containing protein At5g48800...	0.04	OrthoFinder output from all 47 species
AT1G03010	No alias	Phototropic-responsive NPH3 family protein	0.06	OrthoFinder output from all 47 species
Adi_g072743	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g10641	No alias	substrate adaptor *(NCL/NCH) of CUL3-BTB E3 ubiquitin...	0.04	OrthoFinder output from all 47 species
Azfi_s0037.g025944	No alias	not classified & original description: CDS=205-1812	0.04	OrthoFinder output from all 47 species
Azfi_s0128.g048748	No alias	not classified & original description: CDS=51-2093	0.05	OrthoFinder output from all 47 species
Dcu_g13792	No alias	substrate adaptor *(NRL) of CUL3-based E3 ubiquitin...	0.03	OrthoFinder output from all 47 species
Nbi_g04368	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g01259	No alias	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Solyc02g092610.3.1	Solyc02g092610	BTB/POZ domain-containing protein SR1IP1 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
Tin_g09159	No alias	not classified & original description: none	0.05	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0004871	obsolete signal transducer activity	ISS	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009314	response to radiation	None	Extended
BP	GO:0009416	response to light stimulus	ISS	Interproscan
CC	GO:0009507	chloroplast	ISM	Interproscan
CC	GO:0009536	plastid	None	Extended
BP	GO:0009628	response to abiotic stimulus	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR027356	NPH3_dom	197	442
IPR000210	BTB/POZ_dom	37	127

External Links

No external refs found!