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Description : BEST Arabidopsis thaliana protein match is: Late embryogenesis abundant protein, group 2 (TAIR:AT3G24600.1); Has 161 Blast hits to 158 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 161; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Gene families : OG0001442 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001442_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00022p00252730 | evm_27.TU.AmTr_v1... | No description available | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00030p00122220 | evm_27.TU.AmTr_v1... | No description available | 0.02 | OrthoFinder output from all 47 species | |
| AT1G45688 | No alias | unknown protein; FUNCTIONS IN: molecular_function... | 0.07 | OrthoFinder output from all 47 species | |
| AT3G24605 | No alias | No description available | 0.06 | OrthoFinder output from all 47 species | |
| Adi_g043372 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g103178 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g07747 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g16993 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g01600 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g04264 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Als_g07007 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g04907 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g00399 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g07269 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g12485 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g59912 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene22107.t1 | Aspi01Gene22107 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g07489 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.01G076700.1 | Ceric.01G076700 | not classified & original description: pacid=50591443... | 0.08 | OrthoFinder output from all 47 species | |
| Ceric.24G024200.1 | Ceric.24G024200 | not classified & original description: pacid=50628716... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.31G048500.1 | Ceric.31G048500 | not classified & original description: pacid=50574815... | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g09294 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Dcu_g25242 | No alias | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Dde_g05823 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g03465 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01017064001 | No alias | No description available | 0.06 | OrthoFinder output from all 47 species | |
| GSVIVT01032090001 | No alias | No description available | 0.08 | OrthoFinder output from all 47 species | |
| Gb_09110 | No alias | microtubule-interacting component CC of cellulose... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_38619 | No alias | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os02g44740.1 | LOC_Os02g44740 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os03g11710.1 | LOC_Os03g11710 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os04g35130.1 | LOC_Os04g35130 | microtubule-interacting component CC of cellulose... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os04g59330.1 | LOC_Os04g59330 | microtubule-interacting component CC of cellulose... | 0.13 | OrthoFinder output from all 47 species | |
| Len_g08351 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Len_g54658 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g31201 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| MA_8816169g0010 | No alias | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| Mp7g12850.1 | No alias | no hits & (original description: none) | 0.06 | OrthoFinder output from all 47 species | |
| Msp_g00420 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g05235 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g29304 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g01283 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g43410 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pnu_g08298 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g14708 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pnu_g17749 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pp3c16_7260V3.1 | Pp3c16_7260 | Late embryogenesis abundant (LEA) hydroxyproline-rich... | 0.01 | OrthoFinder output from all 47 species | |
| Ppi_g02766 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ppi_g62547 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0024.g008965 | No alias | not classified & original description: CDS=1104-2096 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0086.g018396 | No alias | not classified & original description: CDS=285-692 | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g08818 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Solyc01g087140.4.1 | Solyc01g087140 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| Solyc03g120710.2.1 | Solyc03g120710 | no hits & (original description: none) | 0.07 | OrthoFinder output from all 47 species | |
| Solyc04g078750.3.1 | Solyc04g078750 | microtubule-interacting component CC of cellulose... | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g24382 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Tin_g15181 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e000854_P001 | Zm00001e000854 | no hits & (original description: none) | 0.07 | OrthoFinder output from all 47 species | |
| Zm00001e007480_P002 | Zm00001e007480 | microtubule-interacting component CC of cellulose... | 0.08 | OrthoFinder output from all 47 species | |
| Zm00001e030085_P001 | Zm00001e030085 | no hits & (original description: none) | 0.09 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | ND | Interproscan |
| CC | GO:0005634 | nucleus | ISM | Interproscan |
| BP | GO:0008150 | biological_process | ND | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000271 | polysaccharide biosynthetic process | IEP | HCCA |
| BP | GO:0002238 | response to molecule of fungal origin | IEP | HCCA |
| MF | GO:0005525 | GTP binding | IEP | HCCA |
| CC | GO:0005886 | plasma membrane | IEP | HCCA |
| BP | GO:0005975 | carbohydrate metabolic process | IEP | HCCA |
| BP | GO:0005976 | polysaccharide metabolic process | IEP | HCCA |
| BP | GO:0007015 | actin filament organization | IEP | HCCA |
| BP | GO:0008064 | regulation of actin polymerization or depolymerization | IEP | HCCA |
| BP | GO:0009058 | biosynthetic process | IEP | HCCA |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0009225 | nucleotide-sugar metabolic process | IEP | HCCA |
| BP | GO:0009832 | plant-type cell wall biogenesis | IEP | HCCA |
| BP | GO:0009834 | plant-type secondary cell wall biogenesis | IEP | HCCA |
| BP | GO:0010215 | cellulose microfibril organization | IEP | HCCA |
| BP | GO:0010383 | cell wall polysaccharide metabolic process | IEP | HCCA |
| BP | GO:0010410 | hemicellulose metabolic process | IEP | HCCA |
| BP | GO:0010413 | glucuronoxylan metabolic process | IEP | HCCA |
| CC | GO:0016020 | membrane | IEP | HCCA |
| BP | GO:0016051 | carbohydrate biosynthetic process | IEP | HCCA |
| CC | GO:0016324 | apical plasma membrane | IEP | HCCA |
| BP | GO:0017157 | regulation of exocytosis | IEP | HCCA |
| MF | GO:0019001 | guanyl nucleotide binding | IEP | HCCA |
| BP | GO:0019321 | pentose metabolic process | IEP | HCCA |
| BP | GO:0030198 | extracellular matrix organization | IEP | HCCA |
| BP | GO:0030832 | regulation of actin filament length | IEP | HCCA |
| BP | GO:0030833 | regulation of actin filament polymerization | IEP | HCCA |
| CC | GO:0031225 | obsolete anchored component of membrane | IEP | HCCA |
| BP | GO:0032271 | regulation of protein polymerization | IEP | HCCA |
| BP | GO:0032535 | regulation of cellular component size | IEP | HCCA |
| MF | GO:0032561 | guanyl ribonucleotide binding | IEP | HCCA |
| BP | GO:0032956 | regulation of actin cytoskeleton organization | IEP | HCCA |
| BP | GO:0032970 | regulation of actin filament-based process | IEP | HCCA |
| BP | GO:0033692 | cellular polysaccharide biosynthetic process | IEP | HCCA |
| BP | GO:0034637 | cellular carbohydrate biosynthetic process | IEP | HCCA |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0042546 | cell wall biogenesis | IEP | HCCA |
| BP | GO:0042732 | D-xylose metabolic process | IEP | HCCA |
| BP | GO:0043062 | extracellular structure organization | IEP | HCCA |
| BP | GO:0043254 | regulation of protein-containing complex assembly | IEP | HCCA |
| BP | GO:0044036 | cell wall macromolecule metabolic process | IEP | HCCA |
| BP | GO:0044038 | cell wall macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0044085 | cellular component biogenesis | IEP | HCCA |
| BP | GO:0044087 | regulation of cellular component biogenesis | IEP | HCCA |
| BP | GO:0044249 | cellular biosynthetic process | IEP | HCCA |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
| BP | GO:0044262 | cellular carbohydrate metabolic process | IEP | HCCA |
| BP | GO:0044264 | cellular polysaccharide metabolic process | IEP | HCCA |
| BP | GO:0045491 | xylan metabolic process | IEP | HCCA |
| BP | GO:0045492 | xylan biosynthetic process | IEP | HCCA |
| MF | GO:0046910 | pectinesterase inhibitor activity | IEP | HCCA |
| BP | GO:0051046 | regulation of secretion | IEP | HCCA |
| BP | GO:0051493 | regulation of cytoskeleton organization | IEP | HCCA |
| BP | GO:0051648 | vesicle localization | IEP | HCCA |
| BP | GO:0051650 | establishment of vesicle localization | IEP | HCCA |
| BP | GO:0060627 | regulation of vesicle-mediated transport | IEP | HCCA |
| BP | GO:0070589 | cellular component macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0070592 | cell wall polysaccharide biosynthetic process | IEP | HCCA |
| BP | GO:0071554 | cell wall organization or biogenesis | IEP | HCCA |
| BP | GO:0071669 | plant-type cell wall organization or biogenesis | IEP | HCCA |
| BP | GO:0090066 | regulation of anatomical structure size | IEP | HCCA |
| BP | GO:0097435 | supramolecular fiber organization | IEP | HCCA |
| CC | GO:0098590 | plasma membrane region | IEP | HCCA |
| BP | GO:0110053 | regulation of actin filament organization | IEP | HCCA |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | HCCA |
| BP | GO:1902903 | regulation of supramolecular fiber organization | IEP | HCCA |
| BP | GO:1903530 | regulation of secretion by cell | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |