AT3G08030

Description : Protein of unknown function, DUF642

Gene families : OG0003264 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003264_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT3G08030

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00042p00185900	evm_27.TU.AmTr_v1...	No description available	0.04	OrthoFinder output from all 47 species
AMTR_s00141p00085330	evm_27.TU.AmTr_v1...	No description available	0.05	OrthoFinder output from all 47 species
AMTR_s00141p00087130	evm_27.TU.AmTr_v1...	No description available	0.03	OrthoFinder output from all 47 species
AMTR_s00141p00087190	evm_27.TU.AmTr_v1...	No description available	0.06	OrthoFinder output from all 47 species
AMTR_s00141p00103540	evm_27.TU.AmTr_v1...	No description available	0.03	OrthoFinder output from all 47 species
AT1G80240	No alias	Protein of unknown function, DUF642	0.08	OrthoFinder output from all 47 species
AT2G41800	No alias	Protein of unknown function, DUF642	0.07	OrthoFinder output from all 47 species
Cba_g55088	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
GSVIVT01033286001	No alias	No description available	0.07	OrthoFinder output from all 47 species
Gb_14930	No alias	no hits & (original description: none)	0.06	OrthoFinder output from all 47 species
LOC_Os01g42520.1	LOC_Os01g42520	no hits & (original description: none)	0.05	OrthoFinder output from all 47 species
LOC_Os01g55190.1	LOC_Os01g55190	no hits & (original description: none)	0.04	OrthoFinder output from all 47 species
LOC_Os03g59300.1	LOC_Os03g59300	no hits & (original description: none)	0.07	OrthoFinder output from all 47 species
LOC_Os04g41710.1	LOC_Os04g41710	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
LOC_Os04g41740.1	LOC_Os04g41740	no hits & (original description: none)	0.04	OrthoFinder output from all 47 species
LOC_Os07g04050.1	LOC_Os07g04050	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
LOC_Os07g10620.1	LOC_Os07g10620	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
MA_10434741g0010	No alias	no hits & (original description: none)	0.05	OrthoFinder output from all 47 species
MA_169757g0010	No alias	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
MA_201516g0020	No alias	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
MA_251322g0010	No alias	no hits & (original description: none)	0.04	OrthoFinder output from all 47 species
MA_54830g0010	No alias	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
MA_770477g0010	No alias	no hits & (original description: none)	0.06	OrthoFinder output from all 47 species
Solyc03g120040.3.1	Solyc03g120040	no hits & (original description: none)	0.05	OrthoFinder output from all 47 species
Solyc06g067910.3.1	Solyc06g067910	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
Solyc08g067030.3.1	Solyc08g067030	no hits & (original description: none)	0.06	OrthoFinder output from all 47 species
Solyc12g042930.2.1	Solyc12g042930	no hits & (original description: none)	0.05	OrthoFinder output from all 47 species
Zm00001e007711_P001	Zm00001e007711	no hits & (original description: none)	0.09	OrthoFinder output from all 47 species
Zm00001e007713_P001	Zm00001e007713	no hits & (original description: none)	0.04	OrthoFinder output from all 47 species
Zm00001e007714_P001	Zm00001e007714	no hits & (original description: none)	0.05	OrthoFinder output from all 47 species
Zm00001e013973_P001	Zm00001e013973	no hits & (original description: none)	0.04	OrthoFinder output from all 47 species
Zm00001e020676_P001	Zm00001e020676	no hits & (original description: none)	0.06	OrthoFinder output from all 47 species
Zm00001e041141_P001	Zm00001e041141	no hits & (original description: none)	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0003006	developmental process involved in reproduction	None	Extended
MF	GO:0003674	molecular_function	ND	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005618	cell wall	IDA	Interproscan
CC	GO:0005886	plasma membrane	IDA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006778	porphyrin-containing compound metabolic process	None	Extended
BP	GO:0006779	porphyrin-containing compound biosynthetic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0007165	signal transduction	None	Extended
BP	GO:0008150	biological_process	ND	Interproscan
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
CC	GO:0009507	chloroplast	ISM	Interproscan
CC	GO:0009536	plastid	None	Extended
BP	GO:0009740	gibberellic acid mediated signaling pathway	RCA	Interproscan
BP	GO:0009755	hormone-mediated signaling pathway	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010162	seed dormancy process	RCA	Interproscan
BP	GO:0010476	gibberellin mediated signaling pathway	None	Extended
BP	GO:0015994	chlorophyll metabolic process	None	Extended
BP	GO:0015995	chlorophyll biosynthetic process	RCA	Interproscan
CC	GO:0016020	membrane	None	Extended
BP	GO:0018130	heterocycle biosynthetic process	None	Extended
BP	GO:0019438	aromatic compound biosynthetic process	None	Extended
BP	GO:0022414	reproductive process	None	Extended
BP	GO:0022611	dormancy process	None	Extended
CC	GO:0030312	external encapsulating structure	None	Extended
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0033013	tetrapyrrole metabolic process	None	Extended
BP	GO:0033014	tetrapyrrole biosynthetic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0042440	pigment metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0046148	pigment biosynthetic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0048609	multicellular organismal reproductive process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000041	transition metal ion transport	IEP	HCCA
MF	GO:0005507	copper ion binding	IEP	HCCA
BP	GO:0006825	copper ion transport	IEP	HCCA
BP	GO:0007015	actin filament organization	IEP	HCCA
BP	GO:0007155	cell adhesion	IEP	HCCA
BP	GO:0009888	tissue development	IEP	HCCA
BP	GO:0010053	root epidermal cell differentiation	IEP	HCCA
BP	GO:0010087	phloem or xylem histogenesis	IEP	HCCA
BP	GO:0010089	xylem development	IEP	HCCA
BP	GO:0010090	trichome morphogenesis	IEP	HCCA
BP	GO:0021700	developmental maturation	IEP	HCCA
MF	GO:0042802	identical protein binding	IEP	HCCA
MF	GO:0042803	protein homodimerization activity	IEP	HCCA
BP	GO:0044036	cell wall macromolecule metabolic process	IEP	HCCA
BP	GO:0045010	actin nucleation	IEP	HCCA
MF	GO:0046983	protein dimerization activity	IEP	HCCA
BP	GO:0048364	root development	IEP	HCCA
BP	GO:0048469	cell maturation	IEP	HCCA
BP	GO:0048764	trichoblast maturation	IEP	HCCA
BP	GO:0048765	root hair cell differentiation	IEP	HCCA
BP	GO:0048856	anatomical structure development	IEP	HCCA
BP	GO:0071695	anatomical structure maturation	IEP	HCCA
BP	GO:0090627	plant epidermal cell differentiation	IEP	HCCA
BP	GO:0097435	supramolecular fiber organization	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR006946	DGR2-like_dom	194	361
IPR006946	DGR2-like_dom	27	183

External Links

No external refs found!

AT3G08030

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation