Pnu_g30109


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g30109

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00272900 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
AT4G14850 LOI1, MEF11 Pentatricopeptide repeat (PPR) superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g004274 LPA66 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g004462 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g004975 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g005640 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g015699 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g023691 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g033744 MEF19 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g036754 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g046905 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g055145 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g059661 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g069089 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g069156 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g075582 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g079640 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g098810 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g103055 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g108983 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g111634 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g112114 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g32974 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g05316 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g07462 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g09099 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g14520 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g16839 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g21042 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g22758 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g24099 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g31944 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g33780 DOT4 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g36018 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06136 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06363 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g07125 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g07162 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g07401 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g15782 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18758 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g18939 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30201 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30855 CRR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g31156 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g39900 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g55125 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g59996 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g06731 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g09005 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g11891 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g24428 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g28685 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g37107 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g41404 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g09002 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene18627.t1 Aspi01Gene18627 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene24425.t1 OSB1, Aspi01Gene24425 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene34744.t1 Aspi01Gene34744 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene52031.t1 Aspi01Gene52031 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0005.g009022 No alias not classified & original description: CDS=1-2334 0.03 OrthoFinder output from all 47 species
Azfi_s0117.g046573 No alias not classified & original description: CDS=1-1419 0.02 OrthoFinder output from all 47 species
Azfi_s0312.g064188 No alias not classified & original description: CDS=1-2817 0.05 OrthoFinder output from all 47 species
Azfi_s0934.g093088 No alias not classified & original description: CDS=1-1296 0.03 OrthoFinder output from all 47 species
Cba_g06861 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07667 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g12399 DOT4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g30018 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g45942 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.19G004000.1 CRR2, Ceric.19G004000 not classified & original description: pacid=50575630... 0.04 OrthoFinder output from all 47 species
Ceric.36G021900.1 Ceric.36G021900 not classified & original description: pacid=50568285... 0.03 OrthoFinder output from all 47 species
Dcu_g08816 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g18940 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g32689 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g45940 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g06719 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g16071 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g18184 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g24658 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g30238 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01008407001 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.02 OrthoFinder output from all 47 species
Gb_16062 OTP84 Pentatricopeptide repeat-containing protein DOT4,... 0.03 OrthoFinder output from all 47 species
LOC_Os04g33840.1 LOC_Os04g33840 Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
LOC_Os05g38190.2 LOC_Os05g38190 Pentatricopeptide repeat-containing protein At2g27610... 0.02 OrthoFinder output from all 47 species
LOC_Os08g06490.2 SLO1, LOC_Os08g06490 Pentatricopeptide repeat-containing protein At4g22760... 0.02 OrthoFinder output from all 47 species
Len_g03869 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g21362 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g43456 DOT4 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g54485 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g54965 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g05604 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_381817g0020 No alias Pentatricopeptide repeat-containing protein At2g22070... 0.02 OrthoFinder output from all 47 species
MA_7907g0020 OTP84 Pentatricopeptide repeat-containing protein At3g57430,... 0.02 OrthoFinder output from all 47 species
Msp_g17153 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g20568 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g41402 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g46446 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g06762 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g15549 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g18275 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g22141 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g25278 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g27841 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g27959 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g08941 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g15249 PTAC9, OSB2 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g03334 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g03395 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g11385 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g12790 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57973 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57976 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g63511 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63864 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g03818 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g04505 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g13709 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g15487 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g20310 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g20888 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g22120 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g23560 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g29840 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g29945 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g30310 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06477 EMB2758 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g06851 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g14586 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g17432 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g29483 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g29785 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g31149 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g31751 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g41025 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53019 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53376 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g56302 EMB2261 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g61853 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0009.g004510 No alias not classified & original description: CDS=121-2523 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0019.g007869 No alias not classified & original description: CDS=1-2253 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0186.g025088 No alias not classified & original description: CDS=1-2760 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0244.g026675 No alias not classified & original description: CDS=1-1575 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0245.g026691 No alias not classified & original description: CDS=1-2898 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0264.g026932 VAC1, ECB2, ATECB2 not classified & original description: CDS=1-2163 0.03 OrthoFinder output from all 47 species
Sam_g09699 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g25244 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g27788 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g49275 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g50428 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo100621 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.03 OrthoFinder output from all 47 species
Smo92456 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.05 OrthoFinder output from all 47 species
Solyc01g007850.2.1 Solyc01g007850 Pentatricopeptide repeat-containing protein At4g13650... 0.02 OrthoFinder output from all 47 species
Solyc01g108180.4.1 Solyc01g108180 RNA editing factor (MEF8). RNA editing factor (BLX) 0.03 OrthoFinder output from all 47 species
Solyc05g023900.1.1 Solyc05g023900 Putative pentatricopeptide repeat-containing protein... 0.04 OrthoFinder output from all 47 species
Solyc06g048900.1.1 Solyc06g048900 Pentatricopeptide repeat-containing protein At2g40720... 0.04 OrthoFinder output from all 47 species
Spa_g05652 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g12611 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g14170 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g14770 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g22574 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g22664 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g23504 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g23700 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g26887 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g05207 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g06105 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g10298 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g29098 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e037542_P001 Zm00001e037542 Pentatricopeptide repeat-containing protein At4g16470... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 224 272
IPR002885 Pentatricopeptide_repeat 426 471
IPR002885 Pentatricopeptide_repeat 23 71
IPR002885 Pentatricopeptide_repeat 123 171
IPR002885 Pentatricopeptide_repeat 527 574
IPR002885 Pentatricopeptide_repeat 326 373
No external refs found!