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  5. AT3G06460

AT3G06460


Description : GNS1/SUR4 membrane protein family


Gene families : OG0002313 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002313_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G06460
Cluster HCCA: Cluster_111

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene59872.t1 Aspi01Gene59872 fatty acid elongation condensing enzyme *(ELO) &... 0.03 OrthoFinder output from all 47 species
Dcu_g13991 No alias fatty acid elongation condensing enzyme *(ELO) &... 0.03 OrthoFinder output from all 47 species
GSVIVT01009644001 No alias Elongation of fatty acids protein 3-like OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_34825 No alias Elongation of fatty acids protein 3-like OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
LOC_Os03g49480.1 LOC_Os03g49480 Elongation of fatty acids protein 3-like OS=Arabidopsis... 0.07 OrthoFinder output from all 47 species
MA_356436g0010 No alias Elongation of fatty acids protein 3-like OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Ore_g30311 No alias fatty acid elongation condensing enzyme *(ELO) &... 0.04 OrthoFinder output from all 47 species
Smo92818 No alias Elongation of fatty acids protein 3-like OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Solyc10g046830.2.1 Solyc10g046830 Elongation of fatty acids protein 3-like OS=Arabidopsis... 0.12 OrthoFinder output from all 47 species
Spa_g15995 No alias fatty acid elongation condensing enzyme *(ELO) &... 0.03 OrthoFinder output from all 47 species
Tin_g38992 No alias fatty acid elongation condensing enzyme *(ELO) &... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
BP GO:0008150 biological_process ND Interproscan
BP GO:0016126 sterol biosynthetic process RCA Interproscan
BP GO:0046520 sphingoid biosynthetic process RCA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP HCCA
MF GO:0000217 DNA secondary structure binding IEP HCCA
CC GO:0000323 lytic vacuole IEP HCCA
MF GO:0003680 minor groove of adenine-thymine-rich DNA binding IEP HCCA
MF GO:0003756 protein disulfide isomerase activity IEP HCCA
MF GO:0004311 farnesyltranstransferase activity IEP HCCA
MF GO:0004364 glutathione transferase activity IEP HCCA
MF GO:0004659 prenyltransferase activity IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
BP GO:0006720 isoprenoid metabolic process IEP HCCA
BP GO:0006743 ubiquinone metabolic process IEP HCCA
BP GO:0006744 ubiquinone biosynthetic process IEP HCCA
BP GO:0006749 glutathione metabolic process IEP HCCA
BP GO:0008299 isoprenoid biosynthetic process IEP HCCA
MF GO:0008446 GDP-mannose 4,6-dehydratase activity IEP HCCA
BP GO:0009225 nucleotide-sugar metabolic process IEP HCCA
BP GO:0009640 photomorphogenesis IEP HCCA
BP GO:0009642 response to light intensity IEP HCCA
BP GO:0009646 response to absence of light IEP HCCA
BP GO:0009647 skotomorphogenesis IEP HCCA
MF GO:0009672 auxin:proton symporter activity IEP HCCA
BP GO:0009743 response to carbohydrate IEP HCCA
BP GO:0009746 response to hexose IEP HCCA
BP GO:0009749 response to glucose IEP HCCA
BP GO:0009791 post-embryonic development IEP HCCA
BP GO:0009828 plant-type cell wall loosening IEP HCCA
BP GO:0009831 plant-type cell wall modification involved in multidimensional cell growth IEP HCCA
BP GO:0009832 plant-type cell wall biogenesis IEP HCCA
BP GO:0009834 plant-type secondary cell wall biogenesis IEP HCCA
CC GO:0009925 basal plasma membrane IEP HCCA
BP GO:0009958 positive gravitropism IEP HCCA
MF GO:0010329 auxin efflux transmembrane transporter activity IEP HCCA
BP GO:0010359 regulation of anion channel activity IEP HCCA
BP GO:0010628 positive regulation of gene expression IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0016860 intramolecular oxidoreductase activity IEP HCCA
MF GO:0016864 intramolecular oxidoreductase activity, transposing S-S bonds IEP HCCA
BP GO:0022898 regulation of transmembrane transporter activity IEP HCCA
BP GO:0032409 regulation of transporter activity IEP HCCA
BP GO:0032412 regulation of monoatomic ion transmembrane transporter activity IEP HCCA
BP GO:0032501 multicellular organismal process IEP HCCA
BP GO:0034284 response to monosaccharide IEP HCCA
BP GO:0042181 ketone biosynthetic process IEP HCCA
BP GO:0042546 cell wall biogenesis IEP HCCA
BP GO:0042547 cell wall modification involved in multidimensional cell growth IEP HCCA
BP GO:0044070 regulation of monoatomic anion transport IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
BP GO:0046685 response to arsenic-containing substance IEP HCCA
BP GO:0048364 root development IEP HCCA
BP GO:0048829 root cap development IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071669 plant-type cell wall organization or biogenesis IEP HCCA
MF GO:0080161 auxin transmembrane transporter activity IEP HCCA
CC GO:0098590 plasma membrane region IEP HCCA
BP GO:1901661 quinone metabolic process IEP HCCA
BP GO:1901663 quinone biosynthetic process IEP HCCA
BP GO:1903959 regulation of monoatomic anion transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR002076 ELO_fam 31 268
No external refs found!