AT3G06310

Description : Cox19-like CHCH family protein

Gene families : OG0006496 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006496_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT3G06310
Cluster	HCCA: Cluster_5

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00164p00050110	evm_27.TU.AmTr_v1...	Cellular respiration.oxidative phosphorylation.NADH...	0.06	OrthoFinder output from all 47 species
Ceric.27G055400.1	Ceric.27G055400	component *(NDUFA8/PGIV) of NADH dehydrogenase alpha...	0.04	OrthoFinder output from all 47 species
Cre07.g333900	No alias	Cellular respiration.oxidative phosphorylation.NADH...	0.03	OrthoFinder output from all 47 species
Ehy_g00239	No alias	component *(NDUFA8/PGIV) of NADH dehydrogenase alpha...	0.04	OrthoFinder output from all 47 species
GSVIVT01017834001	No alias	Cellular respiration.oxidative phosphorylation.NADH...	0.04	OrthoFinder output from all 47 species
Gb_25648	No alias	component NDUFA8 of NADH dehydrogenase alpha subcomplex	0.05	OrthoFinder output from all 47 species
LOC_Os03g18420.1	LOC_Os03g18420	component NDUFA8 of NADH dehydrogenase alpha subcomplex	0.11	OrthoFinder output from all 47 species
Len_g23724	No alias	component *(NDUFA8/PGIV) of NADH dehydrogenase alpha...	0.04	OrthoFinder output from all 47 species
Lfl_g37587	No alias	component *(NDUFA8/PGIV) of NADH dehydrogenase alpha...	0.05	OrthoFinder output from all 47 species
Mp4g15020.1	No alias	component NDUFA8 of NADH dehydrogenase alpha subcomplex	0.06	OrthoFinder output from all 47 species
Pp3c10_17050V3.1	Pp3c10_17050	Cox19-like CHCH family protein	0.01	OrthoFinder output from all 47 species
Sam_g23641	No alias	component *(NDUFA8/PGIV) of NADH dehydrogenase alpha...	0.04	OrthoFinder output from all 47 species
Smo149059	No alias	Cellular respiration.oxidative phosphorylation.NADH...	0.03	OrthoFinder output from all 47 species
Tin_g31746	No alias	component *(NDUFA8/PGIV) of NADH dehydrogenase alpha...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003954	NADH dehydrogenase activity	None	Extended
MF	GO:0003955	NAD(P)H dehydrogenase (quinone) activity	None	Extended
MF	GO:0005215	transporter activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005739	mitochondrion	ISM	Interproscan
CC	GO:0005747	mitochondrial respiratory chain complex I	IDA	Interproscan
BP	GO:0006091	generation of precursor metabolites and energy	None	Extended
BP	GO:0006120	mitochondrial electron transport, NADH to ubiquinone	ISS	Interproscan
MF	GO:0008137	NADH dehydrogenase (ubiquinone) activity	ISS	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0009055	electron transfer activity	None	Extended
BP	GO:0009060	aerobic respiration	None	Extended
CC	GO:0009507	chloroplast	ISM	Interproscan
CC	GO:0009536	plastid	IDA	Interproscan
BP	GO:0009853	photorespiration	RCA	Interproscan
BP	GO:0009987	cellular process	None	Extended
MF	GO:0015399	primary active transmembrane transporter activity	None	Extended
MF	GO:0015453	oxidoreduction-driven active transmembrane transporter activity	None	Extended
BP	GO:0015980	energy derivation by oxidation of organic compounds	None	Extended
MF	GO:0016491	oxidoreductase activity	None	Extended
MF	GO:0016651	oxidoreductase activity, acting on NAD(P)H	None	Extended
MF	GO:0016655	oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	None	Extended
BP	GO:0019646	aerobic electron transport chain	None	Extended
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
BP	GO:0022900	electron transport chain	None	Extended
BP	GO:0022904	respiratory electron transport chain	None	Extended
CC	GO:0030964	NADH dehydrogenase complex	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0043094	cellular metabolic compound salvage	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
CC	GO:0045271	respiratory chain complex I	None	Extended
BP	GO:0045333	cellular respiration	None	Extended
MF	GO:0050136	NADH dehydrogenase (quinone) activity	None	Extended
CC	GO:0098796	membrane protein complex	None	Extended
CC	GO:0098798	mitochondrial protein-containing complex	None	Extended
CC	GO:0098800	inner mitochondrial membrane protein complex	None	Extended
CC	GO:0098803	respiratory chain complex	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
CC	GO:1902494	catalytic complex	None	Extended
CC	GO:1902495	transmembrane transporter complex	None	Extended
CC	GO:1990204	oxidoreductase complex	None	Extended
CC	GO:1990351	transporter complex	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0005507	copper ion binding	IEP	HCCA
BP	GO:0006098	pentose-phosphate shunt	IEP	HCCA
BP	GO:0006508	proteolysis	IEP	HCCA
BP	GO:0006511	ubiquitin-dependent protein catabolic process	IEP	HCCA
BP	GO:0006739	NADP metabolic process	IEP	HCCA
BP	GO:0006740	NADPH regeneration	IEP	HCCA
BP	GO:0009056	catabolic process	IEP	HCCA
BP	GO:0009057	macromolecule catabolic process	IEP	HCCA
CC	GO:0016020	membrane	IEP	HCCA
BP	GO:0019362	pyridine nucleotide metabolic process	IEP	HCCA
BP	GO:0019941	modification-dependent protein catabolic process	IEP	HCCA
BP	GO:0022607	cellular component assembly	IEP	HCCA
CC	GO:0031090	organelle membrane	IEP	HCCA
CC	GO:0031966	mitochondrial membrane	IEP	HCCA
BP	GO:0035966	response to topologically incorrect protein	IEP	HCCA
BP	GO:0043248	proteasome assembly	IEP	HCCA
BP	GO:0043632	modification-dependent macromolecule catabolic process	IEP	HCCA
BP	GO:0043933	protein-containing complex organization	IEP	HCCA
BP	GO:0044248	cellular catabolic process	IEP	HCCA
BP	GO:0044265	cellular macromolecule catabolic process	IEP	HCCA
BP	GO:0046496	nicotinamide nucleotide metabolic process	IEP	HCCA
BP	GO:0051156	glucose 6-phosphate metabolic process	IEP	HCCA
BP	GO:0051603	proteolysis involved in protein catabolic process	IEP	HCCA
BP	GO:0051788	response to misfolded protein	IEP	HCCA
BP	GO:0065003	protein-containing complex assembly	IEP	HCCA
BP	GO:0072524	pyridine-containing compound metabolic process	IEP	HCCA
BP	GO:0080129	proteasome core complex assembly	IEP	HCCA
BP	GO:1901575	organic substance catabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR010625	CHCH	73	107

External Links

No external refs found!

AT3G06310

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation