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Description : RING/U-box superfamily protein
Gene families : OG0000967 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000967_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AT3G06140 | |
| Cluster | HCCA: Cluster_21 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Aev_g09526 | No alias | E3 ubiquitin ligase *(LOG2/LUL) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g01752 | No alias | E3 ubiquitin ligase *(LOG2/LUL) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0074.g037301 | No alias | E3 ubiquitin ligase *(LOG2/LUL) & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.09G086300.1 | Ceric.09G086300 | E3 ubiquitin ligase *(LOG2/LUL) & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.36G047100.1 | Ceric.36G047100 | E3 ubiquitin ligase *(LOG2/LUL) & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g06851 | No alias | E3 ubiquitin ligase *(LOG2/LUL) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g01296 | No alias | E3 ubiquitin ligase *(LOG2/LUL) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g27346 | No alias | E3 ubiquitin ligase *(LOG2/LUL) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01025175001 | No alias | Probable E3 ubiquitin-protein ligase LOG2 OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os03g15000.1 | LOC_Os03g15000 | Probable E3 ubiquitin-protein ligase LOG2 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os05g33000.2 | LOC_Os05g33000 | Probable E3 ubiquitin-protein ligase LUL3 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g09583 | No alias | E3 ubiquitin ligase *(LOG2/LUL) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Solyc01g098750.3.1 | Solyc01g098750 | Probable E3 ubiquitin-protein ligase LUL4 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004842 | ubiquitin-protein transferase activity | IDA | Interproscan |
| CC | GO:0005737 | cytoplasm | ISM | Interproscan |
| MF | GO:0008270 | zinc ion binding | ISS | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0005739 | mitochondrion | IEP | HCCA |
| CC | GO:0005783 | endoplasmic reticulum | IEP | HCCA |
| CC | GO:0005789 | endoplasmic reticulum membrane | IEP | HCCA |
| BP | GO:0006470 | protein dephosphorylation | IEP | HCCA |
| MF | GO:0008170 | N-methyltransferase activity | IEP | HCCA |
| MF | GO:0008276 | protein methyltransferase activity | IEP | HCCA |
| BP | GO:0009880 | embryonic pattern specification | IEP | HCCA |
| MF | GO:0009982 | pseudouridine synthase activity | IEP | HCCA |
| BP | GO:0010072 | primary shoot apical meristem specification | IEP | HCCA |
| BP | GO:0010431 | seed maturation | IEP | HCCA |
| MF | GO:0016278 | lysine N-methyltransferase activity | IEP | HCCA |
| MF | GO:0016279 | protein-lysine N-methyltransferase activity | IEP | HCCA |
| BP | GO:0050829 | defense response to Gram-negative bacterium | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |