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  5. AT3G05430

AT3G05430


Description : Tudor/PWWP/MBT superfamily protein


Gene families : OG0000954 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000954_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G05430
Cluster HCCA: Cluster_110

Target Alias Description ECC score Gene Family Method Actions
AT3G27860 No alias Tudor/PWWP/MBT superfamily protein 0.07 OrthoFinder output from all 47 species
AT5G02950 No alias Tudor/PWWP/MBT superfamily protein 0.05 OrthoFinder output from all 47 species
Adi_g017529 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g060541 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g04183 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g21623 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g29262 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g14356 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g22385 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g06515 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g08295 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os05g38810.1 LOC_Os05g38810 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Lfl_g38053 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10171844g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Nbi_g03857 No alias N-methyltransferase component *(ATX3/4/5) of COMPASS... 0.03 OrthoFinder output from all 47 species
Pir_g46989 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
BP GO:0000162 tryptophan biosynthetic process IEP HCCA
MF GO:0003678 DNA helicase activity IEP HCCA
MF GO:0004592 pantoate-beta-alanine ligase activity IEP HCCA
MF GO:0004640 phosphoribosylanthranilate isomerase activity IEP HCCA
CC GO:0005834 heterotrimeric G-protein complex IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006261 DNA-templated DNA replication IEP HCCA
BP GO:0006275 regulation of DNA replication IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006767 water-soluble vitamin metabolic process IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0007276 gamete generation IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0009309 amine biosynthetic process IEP HCCA
BP GO:0010074 maintenance of meristem identity IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010492 maintenance of shoot apical meristem identity IEP HCCA
BP GO:0015939 pantothenate metabolic process IEP HCCA
BP GO:0015940 pantothenate biosynthetic process IEP HCCA
MF GO:0016860 intramolecular oxidoreductase activity IEP HCCA
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016881 acid-amino acid ligase activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
BP GO:0022414 reproductive process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0032204 regulation of telomere maintenance IEP HCCA
BP GO:0032504 multicellular organism reproduction IEP HCCA
BP GO:0032875 regulation of DNA endoreduplication IEP HCCA
BP GO:0032877 positive regulation of DNA endoreduplication IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
MF GO:0035197 siRNA binding IEP HCCA
BP GO:0042364 water-soluble vitamin biosynthetic process IEP HCCA
BP GO:0042398 cellular modified amino acid biosynthetic process IEP HCCA
BP GO:0042401 biogenic amine biosynthetic process IEP HCCA
MF GO:0043138 3'-5' DNA helicase activity IEP HCCA
BP GO:0043247 telomere maintenance in response to DNA damage IEP HCCA
BP GO:0045596 negative regulation of cell differentiation IEP HCCA
BP GO:0045740 positive regulation of DNA replication IEP HCCA
BP GO:0045787 positive regulation of cell cycle IEP HCCA
BP GO:0046219 indolalkylamine biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0048497 maintenance of floral organ identity IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051052 regulation of DNA metabolic process IEP HCCA
BP GO:0051054 positive regulation of DNA metabolic process IEP HCCA
BP GO:0051128 regulation of cellular component organization IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051302 regulation of cell division IEP HCCA
BP GO:0051726 regulation of cell cycle IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
MF GO:0061980 regulatory RNA binding IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:0090068 positive regulation of cell cycle process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:0090329 regulation of DNA-templated DNA replication IEP HCCA
BP GO:0090700 maintenance of plant organ identity IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
CC GO:1905360 GTPase complex IEP HCCA
BP GO:2000105 positive regulation of DNA-templated DNA replication IEP HCCA
InterPro domains Description Start Stop
IPR000313 PWWP_dom 133 219
No external refs found!