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  5. AT3G03880

AT3G03880


Description : Protein of unknown function (DUF1639)


Gene families : OG0000588 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000588_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G03880

Target Alias Description ECC score Gene Family Method Actions
Ala_g00959 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g16006 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g31995 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aop_g07075 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g06683 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g18608 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g02916 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g01617 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g02712 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005739 mitochondrion ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003684 damaged DNA binding IEP HCCA
MF GO:0003964 RNA-directed DNA polymerase activity IEP HCCA
MF GO:0005200 structural constituent of cytoskeleton IEP HCCA
CC GO:0005694 chromosome IEP HCCA
CC GO:0005885 Arp2/3 protein complex IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006261 DNA-templated DNA replication IEP HCCA
BP GO:0006278 RNA-templated DNA biosynthetic process IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006714 sesquiterpenoid metabolic process IEP HCCA
BP GO:0009555 pollen development IEP HCCA
BP GO:0009687 abscisic acid metabolic process IEP HCCA
BP GO:0009688 abscisic acid biosynthetic process IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0016106 sesquiterpenoid biosynthetic process IEP HCCA
BP GO:0016444 somatic cell DNA recombination IEP HCCA
MF GO:0034061 DNA polymerase activity IEP HCCA
BP GO:0043288 apocarotenoid metabolic process IEP HCCA
BP GO:0043289 apocarotenoid biosynthetic process IEP HCCA
BP GO:0045003 double-strand break repair via synthesis-dependent strand annealing IEP HCCA
BP GO:0048229 gametophyte development IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0071897 DNA biosynthetic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1902644 tertiary alcohol metabolic process IEP HCCA
BP GO:1902645 tertiary alcohol biosynthetic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR012438 DUF1639 117 166
No external refs found!