1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. AT3G03160

AT3G03160


Description : FUNCTIONS IN: molecular_function unknown; INVOLVED IN: intracellular protein transport; LOCATED IN: endomembrane system, integral to membrane, endoplasmic reticulum; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: B-cell receptor-associated 31-like (InterPro:IPR008417); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G17190.1); Has 102 Blast hits to 102 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 102; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).


Gene families : OG0003578 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003578_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G03160
Cluster HCCA: Cluster_5

Target Alias Description ECC score Gene Family Method Actions
Aop_g03005 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_10981 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc04g014490.1.1 Solyc04g014490 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
Tin_g16223 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005739 mitochondrion ISM Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004129 cytochrome-c oxidase activity IEP HCCA
CC GO:0005635 nuclear envelope IEP HCCA
CC GO:0005730 nucleolus IEP HCCA
CC GO:0005731 nucleolus organizer region IEP HCCA
CC GO:0005740 mitochondrial envelope IEP HCCA
CC GO:0005747 mitochondrial respiratory chain complex I IEP HCCA
CC GO:0005749 mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone) IEP HCCA
CC GO:0005750 mitochondrial respiratory chain complex III IEP HCCA
CC GO:0005773 vacuole IEP HCCA
BP GO:0006606 protein import into nucleus IEP HCCA
BP GO:0006625 protein targeting to peroxisome IEP HCCA
BP GO:0006891 intra-Golgi vesicle-mediated transport IEP HCCA
MF GO:0008327 methyl-CpG binding IEP HCCA
MF GO:0008565 obsolete protein transporter activity IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
CC GO:0009536 plastid IEP HCCA
BP GO:0009853 photorespiration IEP HCCA
BP GO:0010351 lithium ion transport IEP HCCA
CC GO:0010369 chromocenter IEP HCCA
CC GO:0010370 perinucleolar chromocenter IEP HCCA
MF GO:0015453 oxidoreduction-driven active transmembrane transporter activity IEP HCCA
BP GO:0015919 peroxisomal membrane transport IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016558 protein import into peroxisome matrix IEP HCCA
MF GO:0016675 oxidoreductase activity, acting on a heme group of donors IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
CC GO:0030874 nucleolar chromatin IEP HCCA
CC GO:0030964 NADH dehydrogenase complex IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0031966 mitochondrial membrane IEP HCCA
CC GO:0031967 organelle envelope IEP HCCA
CC GO:0031975 envelope IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0034504 protein localization to nucleus IEP HCCA
BP GO:0043094 cellular metabolic compound salvage IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043574 peroxisomal transport IEP HCCA
MF GO:0043621 protein self-association IEP HCCA
BP GO:0044743 protein transmembrane import into intracellular organelle IEP HCCA
CC GO:0045257 succinate dehydrogenase complex (ubiquinone) IEP HCCA
CC GO:0045271 respiratory chain complex I IEP HCCA
CC GO:0045275 respiratory chain complex III IEP HCCA
CC GO:0045281 succinate dehydrogenase complex IEP HCCA
CC GO:0045283 fumarate reductase complex IEP HCCA
BP GO:0051170 import into nucleus IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
CC GO:0070069 cytochrome complex IEP HCCA
BP GO:0072662 protein localization to peroxisome IEP HCCA
BP GO:0072663 establishment of protein localization to peroxisome IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0098798 mitochondrial protein-containing complex IEP HCCA
CC GO:0098800 inner mitochondrial membrane protein complex IEP HCCA
CC GO:0098803 respiratory chain complex IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1902495 transmembrane transporter complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
CC GO:1990351 transporter complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!