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AT3G02340


Description : RING/U-box superfamily protein


Gene families : OG0000101 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000101_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G02340

Target Alias Description ECC score Gene Family Method Actions
AT3G60080 No alias RING/U-box superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g008105 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g017038 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g066616 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Aev_g05398 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Ala_g13947 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g04983 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g73123 AIP2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.14G002100.1 Ceric.14G002100 not classified & original description: pacid=50633322... 0.03 OrthoFinder output from all 47 species
Dac_g26518 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g24136 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Ehy_g01134 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Lfl_g11310 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0039.g012146 No alias not classified & original description: CDS=1-969 0.03 OrthoFinder output from all 47 species
Zm00001e004520_P001 Zm00001e004520 E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005737 cytoplasm ISM Interproscan
MF GO:0008270 zinc ion binding ISS Interproscan
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Type GO Term Name Evidence Source
BP GO:0002237 response to molecule of bacterial origin IEP HCCA
BP GO:0002252 immune effector process IEP HCCA
BP GO:0002679 respiratory burst involved in defense response IEP HCCA
MF GO:0004712 protein serine/threonine/tyrosine kinase activity IEP HCCA
MF GO:0005351 carbohydrate:proton symporter activity IEP HCCA
MF GO:0005402 carbohydrate:monoatomic cation symporter activity IEP HCCA
CC GO:0005886 plasma membrane IEP HCCA
CC GO:0005956 protein kinase CK2 complex IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006487 protein N-linked glycosylation IEP HCCA
MF GO:0008134 transcription factor binding IEP HCCA
BP GO:0008219 cell death IEP HCCA
BP GO:0009626 plant-type hypersensitive response IEP HCCA
BP GO:0012501 programmed cell death IEP HCCA
MF GO:0015144 carbohydrate transmembrane transporter activity IEP HCCA
MF GO:0015293 symporter activity IEP HCCA
MF GO:0015294 solute:monoatomic cation symporter activity IEP HCCA
MF GO:0015295 solute:proton symporter activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0019207 kinase regulator activity IEP HCCA
MF GO:0019887 protein kinase regulator activity IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
BP GO:0031647 regulation of protein stability IEP HCCA
BP GO:0034050 programmed cell death induced by symbiont IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0042752 regulation of circadian rhythm IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0044403 biological process involved in symbiotic interaction IEP HCCA
BP GO:0045730 respiratory burst IEP HCCA
BP GO:0050821 protein stabilization IEP HCCA
BP GO:0051702 biological process involved in interaction with symbiont IEP HCCA
MF GO:0051879 Hsp90 protein binding IEP HCCA
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
CC GO:1902554 serine/threonine protein kinase complex IEP HCCA
CC GO:1902911 protein kinase complex IEP HCCA
InterPro domains Description Start Stop
IPR001841 Znf_RING 334 376
No external refs found!