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  5. AT3G02120

AT3G02120


Description : hydroxyproline-rich glycoprotein family protein


Gene families : OG0004312 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004312_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G02120

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00154p00036430 evm_27.TU.AmTr_v1... No description available 0.06 OrthoFinder output from all 47 species
Aev_g28111 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g32387 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g04823 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g10509 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene26216.t1 Aspi01Gene26216 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.27G022500.1 Ceric.27G022500 not classified & original description: pacid=50605994... 0.05 OrthoFinder output from all 47 species
Dac_g12700 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g16238 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g42889 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01032906001 No alias No description available 0.09 OrthoFinder output from all 47 species
Gb_03841 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Gb_26295 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Len_g15554 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g22213 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_16252g0010 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Mp1g00810.1 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Nbi_g02600 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g22942 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc02g088830.4.1 Solyc02g088830 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Spa_g34819 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g32711 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g41878 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0000226 microtubule cytoskeleton organization RCA Interproscan
BP GO:0000911 cytokinesis by cell plate formation RCA Interproscan
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0010583 response to cyclopentenone IEP Interproscan
BP GO:0010583 response to cyclopentenone RCA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000082 G1/S transition of mitotic cell cycle IEP HCCA
BP GO:0000280 nuclear division IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006261 DNA-templated DNA replication IEP HCCA
BP GO:0006275 regulation of DNA replication IEP HCCA
BP GO:0007051 spindle organization IEP HCCA
BP GO:0007346 regulation of mitotic cell cycle IEP HCCA
BP GO:0009735 response to cytokinin IEP HCCA
BP GO:0009741 response to brassinosteroid IEP HCCA
BP GO:0009744 response to sucrose IEP HCCA
BP GO:0010075 regulation of meristem growth IEP HCCA
BP GO:0010103 stomatal complex morphogenesis IEP HCCA
BP GO:0010389 regulation of G2/M transition of mitotic cell cycle IEP HCCA
BP GO:0010564 regulation of cell cycle process IEP HCCA
MF GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity IEP HCCA
BP GO:0016572 obsolete histone phosphorylation IEP HCCA
MF GO:0019207 kinase regulator activity IEP HCCA
MF GO:0019887 protein kinase regulator activity IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
BP GO:0034285 response to disaccharide IEP HCCA
BP GO:0042023 DNA endoreduplication IEP HCCA
BP GO:0042127 regulation of cell population proliferation IEP HCCA
BP GO:0044770 cell cycle phase transition IEP HCCA
BP GO:0044772 mitotic cell cycle phase transition IEP HCCA
BP GO:0044786 cell cycle DNA replication IEP HCCA
BP GO:0044843 cell cycle G1/S phase transition IEP HCCA
BP GO:0048285 organelle fission IEP HCCA
BP GO:0048316 seed development IEP HCCA
BP GO:0048608 reproductive structure development IEP HCCA
BP GO:0051052 regulation of DNA metabolic process IEP HCCA
BP GO:0051225 spindle assembly IEP HCCA
BP GO:0070925 organelle assembly IEP HCCA
BP GO:0090626 plant epidermis morphogenesis IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
BP GO:0140694 non-membrane-bounded organelle assembly IEP HCCA
BP GO:1901987 regulation of cell cycle phase transition IEP HCCA
BP GO:1901990 regulation of mitotic cell cycle phase transition IEP HCCA
BP GO:1902749 regulation of cell cycle G2/M phase transition IEP HCCA
BP GO:1903047 mitotic cell cycle process IEP HCCA

No InterPro domains available for this sequence

No external refs found!