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  5. AT3G01760

AT3G01760


Description : Transmembrane amino acid transporter family protein


Gene families : OG0000789 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000789_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G01760
Cluster HCCA: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00005p00198670 LHT1,... Solute transport.carrier-mediated transport.APC... 0.06 OrthoFinder output from all 47 species
AT5G40780 LHT1 lysine histidine transporter 1 0.07 OrthoFinder output from all 47 species
Adi_g016074 No alias amino acid transporter *(LHT) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g04359 LHT1 amino acid transporter *(LHT) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g22054 LHT1 amino acid transporter *(LHT) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene29220.t1 LHT1, Aspi01Gene29220 amino acid transporter *(LHT) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene59630.t1 LHT1, Aspi01Gene59630 amino acid transporter *(LHT) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene69019.t1 LHT1, Aspi01Gene69019 amino acid transporter *(LHT) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0037.g025973 LHT1 amino acid transporter *(LHT) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.01G051400.1 Ceric.01G051400 amino acid transporter *(LHT) & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.05G025600.1 LHT1, Ceric.05G025600 amino acid transporter *(LHT) & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g05468 LHT1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g15300 LHT1 amino acid transporter *(LHT) & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g16448 LHT1 amino acid transporter *(LHT) & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g31675 LHT1 amino acid transporter *(LHT) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g26209 LHT2, AATL2, ATLHT2 amino acid transporter *(LHT) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g12864 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g16810 LHT1 amino acid transporter *(LHT) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g19768 LHT1 amino acid transporter *(LHT) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01008696001 No alias Solute transport.carrier-mediated transport.APC... 0.04 OrthoFinder output from all 47 species
GSVIVT01010333001 LHT1 Solute transport.carrier-mediated transport.APC... 0.05 OrthoFinder output from all 47 species
GSVIVT01010335001 LHT2, AATL2, ATLHT2 Solute transport.carrier-mediated transport.APC... 0.04 OrthoFinder output from all 47 species
GSVIVT01010349001 LHT2, AATL2, ATLHT2 Solute transport.carrier-mediated transport.APC... 0.05 OrthoFinder output from all 47 species
GSVIVT01010351001 LHT2, AATL2, ATLHT2 Solute transport.carrier-mediated transport.APC... 0.03 OrthoFinder output from all 47 species
GSVIVT01010355001 LHT1 Solute transport.carrier-mediated transport.APC... 0.06 OrthoFinder output from all 47 species
Gb_30296 LHT2, AATL2, ATLHT2 amino acid transporter (LHT) 0.03 OrthoFinder output from all 47 species
LOC_Os04g38860.2 LOC_Os04g38860 amino acid transporter (LHT) 0.06 OrthoFinder output from all 47 species
LOC_Os12g14100.1 LHT2, AATL2,... amino acid transporter (LHT) 0.03 OrthoFinder output from all 47 species
Len_g09346 LHT1 amino acid transporter *(LHT) & original description: none 0.03 OrthoFinder output from all 47 species
MA_126371g0010 LHT1 amino acid transporter (LHT) 0.05 OrthoFinder output from all 47 species
MA_25045g0010 LHT1 amino acid transporter (LHT) 0.04 OrthoFinder output from all 47 species
Ppi_g26727 LHT1 amino acid transporter *(LHT) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g30112 No alias amino acid transporter *(LHT) & original description: none 0.02 OrthoFinder output from all 47 species
Smo173454 LHT1 Solute transport.carrier-mediated transport.APC... 0.03 OrthoFinder output from all 47 species
Solyc03g111040.2.1 LHT2, AATL2,... amino acid transporter (LHT) 0.02 OrthoFinder output from all 47 species
Solyc05g009700.4.1 Solyc05g009700 amino acid transporter (LHT) 0.04 OrthoFinder output from all 47 species
Tin_g28385 LHT1 amino acid transporter *(LHT) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e029254_P003 LHT1, Zm00001e029254 amino acid transporter (LHT) 0.03 OrthoFinder output from all 47 species
Zm00001e029256_P001 LHT1, Zm00001e029256 amino acid transporter (LHT) 0.03 OrthoFinder output from all 47 species
Zm00001e029258_P001 LHT1, Zm00001e029258 amino acid transporter (LHT) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005275 amine transmembrane transporter activity ISS Interproscan
CC GO:0005886 plasma membrane ISM Interproscan
BP GO:0006865 amino acid transport ISS Interproscan
MF GO:0015171 amino acid transmembrane transporter activity ISS Interproscan
CC GO:0016020 membrane ISS Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP HCCA
MF GO:0005385 zinc ion transmembrane transporter activity IEP HCCA
CC GO:0005783 endoplasmic reticulum IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0006826 iron ion transport IEP HCCA
BP GO:0006829 zinc ion transport IEP HCCA
BP GO:0007154 cell communication IEP HCCA
BP GO:0009267 cellular response to starvation IEP HCCA
BP GO:0009741 response to brassinosteroid IEP HCCA
BP GO:0009926 auxin polar transport IEP HCCA
BP GO:0009991 response to extracellular stimulus IEP HCCA
BP GO:0010106 cellular response to iron ion starvation IEP HCCA
BP GO:0010167 response to nitrate IEP HCCA
BP GO:0010315 auxin export across the plasma membrane IEP HCCA
BP GO:0010540 basipetal auxin transport IEP HCCA
BP GO:0010541 acropetal auxin transport IEP HCCA
BP GO:0010928 regulation of auxin mediated signaling pathway IEP HCCA
BP GO:0015698 inorganic anion transport IEP HCCA
BP GO:0015706 nitrate transmembrane transport IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
BP GO:0031667 response to nutrient levels IEP HCCA
BP GO:0031668 cellular response to extracellular stimulus IEP HCCA
BP GO:0031669 cellular response to nutrient levels IEP HCCA
BP GO:0042594 response to starvation IEP HCCA
MF GO:0046915 transition metal ion transmembrane transporter activity IEP HCCA
BP GO:0048440 carpel development IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0060918 auxin transport IEP HCCA
BP GO:0071496 cellular response to external stimulus IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098661 inorganic anion transmembrane transport IEP HCCA
BP GO:0140115 export across plasma membrane IEP HCCA
BP GO:0140352 export from cell IEP HCCA
BP GO:1901698 response to nitrogen compound IEP HCCA
BP GO:1902025 nitrate import IEP HCCA
InterPro domains Description Start Stop
IPR013057 AA_transpt_TM 33 430
No external refs found!