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AT3G01650 (RGLG1)


Aliases : RGLG1

Description : RING domain ligase1


Gene families : OG0000455 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000455_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G01650
Cluster HCCA: Cluster_79

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00166p00070360 RGLG2,... Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
Cba_g05132 No alias E3 ubiquitin ligase *(RGLG) & original description: none 0.02 OrthoFinder output from all 47 species
Cre09.g399550 RGLG2 Protein degradation.peptide tagging.Ubiquitin... 0.01 OrthoFinder output from all 47 species
Dac_g35423 No alias E3 ubiquitin ligase *(RGLG) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g01231 RGLG2 E3 ubiquitin ligase *(RGLG) & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os01g68060.1 RGLG2, LOC_Os01g68060 RING-HC-class E3 ligase. ligating E3 protein (RGLG) 0.03 OrthoFinder output from all 47 species
MA_10428350g0010 No alias RING-HC-class E3 ligase. ligating E3 protein (RGLG) 0.02 OrthoFinder output from all 47 species
Nbi_g17342 No alias E3 ubiquitin ligase *(RGLG) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g06814 RGLG1 E3 ubiquitin ligase *(RGLG) & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IDA Interproscan
CC GO:0005886 plasma membrane IDA Interproscan
CC GO:0005886 plasma membrane ISM Interproscan
BP GO:0009690 cytokinin metabolic process IGI Interproscan
BP GO:0009690 cytokinin metabolic process RCA Interproscan
BP GO:0009850 auxin metabolic process IGI Interproscan
BP GO:0080148 negative regulation of response to water deprivation IGI Interproscan
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Type GO Term Name Evidence Source
CC GO:0000159 protein phosphatase type 2A complex IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
BP GO:0006354 DNA-templated transcription elongation IEP HCCA
CC GO:0008287 protein serine/threonine phosphatase complex IEP HCCA
BP GO:0009306 protein secretion IEP HCCA
BP GO:0009408 response to heat IEP HCCA
MF GO:0015450 protein-transporting ATPase activity IEP HCCA
BP GO:0030148 sphingolipid biosynthetic process IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0032940 secretion by cell IEP HCCA
BP GO:0034605 cellular response to heat IEP HCCA
BP GO:0035592 establishment of protein localization to extracellular region IEP HCCA
BP GO:0042991 obsolete transcription factor import into nucleus IEP HCCA
MF GO:0045140 inositol phosphoceramide synthase activity IEP HCCA
BP GO:0046903 secretion IEP HCCA
BP GO:0071692 protein localization to extracellular region IEP HCCA
BP GO:0140352 export from cell IEP HCCA
CC GO:1903293 phosphatase complex IEP HCCA
InterPro domains Description Start Stop
IPR010734 Copine_C 179 393
No external refs found!