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AT2G47560


Description : RING/U-box superfamily protein


Gene families : OG0000008 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G47560

Target Alias Description ECC score Gene Family Method Actions
AT5G05280 No alias RING/U-box superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G06490 No alias RING/U-box superfamily protein 0.01 OrthoFinder output from all 47 species
Gb_05005 BRH1 E3 ubiquitin-protein ligase RHA1B OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Gb_28973 BRH1 Probable E3 ubiquitin-protein ligase RHA1A... 0.01 OrthoFinder output from all 47 species
LOC_Os06g07100.2 LOC_Os06g07100 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
LOC_Os10g39450.1 RHA3B, LOC_Os10g39450 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Pir_g34365 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Zm00001e015259_P001 Zm00001e015259 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
MF GO:0008270 zinc ion binding ISS Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001841 Znf_RING 107 150
No external refs found!