AT2G47000 (ATPGP4, PGP4, ABCB4, MDR4)


Aliases : ATPGP4, PGP4, ABCB4, MDR4

Description : ATP binding cassette subfamily B4


Gene families : OG0000048 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G47000
Cluster HCCA: Cluster_113

Target Alias Description ECC score Gene Family Method Actions
AT3G28345 No alias ABC transporter family protein 0.03 OrthoFinder output from all 47 species
AT3G28360 PGP16 P-glycoprotein 16 0.05 OrthoFinder output from all 47 species
AT3G62150 PGP21 P-glycoprotein 21 0.04 OrthoFinder output from all 47 species
AT4G01820 PGP3, MDR3 P-glycoprotein 3 0.03 OrthoFinder output from all 47 species
AT4G18050 PGP9 P-glycoprotein 9 0.03 OrthoFinder output from all 47 species
Adi_g056640 ABCB19,... subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Als_g39233 ABCB19,... subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g18500 ABCB19,... subfamily ABCB transporter & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g37349 PGP11 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g06806 ABCB19,... subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g22138 ABCB19,... subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g38133 No alias subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g42964 PGP11 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene46501.t1 ABCB19,... subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0039.g026389 PGP11 subfamily ABCB transporter & original description: CDS=323-4378 0.03 OrthoFinder output from all 47 species
Cba_g75977 No alias subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g35376 PGP21 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g47815 PGP11 not classified & original description: none 0.07 OrthoFinder output from all 47 species
GSVIVT01028256001 PGP11 Solute transport.primary active transport.ABC... 0.04 OrthoFinder output from all 47 species
GSVIVT01032578001 No alias Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
Gb_07563 ABCB19,... subfamily ABCB transporter 0.03 OrthoFinder output from all 47 species
Gb_32125 PGP11 subfamily ABCB transporter 0.02 OrthoFinder output from all 47 species
Gb_36503 No alias serine carboxypeptidase. subfamily ABCB transporter 0.03 OrthoFinder output from all 47 species
LOC_Os01g18670.1 PGP21, LOC_Os01g18670 subfamily ABCB transporter 0.02 OrthoFinder output from all 47 species
LOC_Os01g35030.1 PGP11, LOC_Os01g35030 subfamily ABCB transporter 0.06 OrthoFinder output from all 47 species
LOC_Os01g50160.1 PGP11, LOC_Os01g50160 subfamily ABCB transporter 0.03 OrthoFinder output from all 47 species
LOC_Os02g09720.1 LOC_Os02g09720 subfamily ABCB transporter 0.03 OrthoFinder output from all 47 species
LOC_Os05g47500.1 PGP9, LOC_Os05g47500 subfamily ABCB transporter 0.07 OrthoFinder output from all 47 species
Len_g16355 ABCB19,... subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
MA_100742g0020 PGP16 ABC transporter B family member 16 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
MA_10134765g0010 PGP11 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_10280832g0010 PGP11 ABC transporter B family member 7 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_107576g0010 No alias subfamily ABCB transporter 0.03 OrthoFinder output from all 47 species
MA_145496g0010 No alias ABC transporter B family member 15 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_3437g0010 No alias subfamily ABCB transporter 0.04 OrthoFinder output from all 47 species
MA_8590327g0010 No alias ABC transporter B family member 17 OS=Arabidopsis... 0.06 OrthoFinder output from all 47 species
MA_9148200g0010 No alias ABC transporter B family member 15 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Ore_g13949 PGP12 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g04029 PGP11 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g14316 PGP2 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g47038 PGP9 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g57324 ATPGP4, PGP4, ABCB4, MDR4 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g65660 ABCB19,... subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g20355 PGP21 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c1_7210V3.1 ABCB19,... ATP binding cassette subfamily B19 0.01 OrthoFinder output from all 47 species
Sam_g27139 No alias subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g34273 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo123915 PGP11 Solute transport.primary active transport.ABC... 0.07 OrthoFinder output from all 47 species
Solyc06g009290.4.1 PGP21, Solyc06g009290 subfamily ABCB transporter 0.02 OrthoFinder output from all 47 species
Solyc09g008240.3.1 PGP1, ABCB1,... subfamily ABCB transporter 0.03 OrthoFinder output from all 47 species
Solyc12g049130.1.1 Solyc12g049130 ABC transporter B family member 22 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Tin_g08424 PGP11 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g11244 ABCB19,... subfamily ABCB transporter & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g21567 No alias subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g41430 PGP11 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e020070_P001 ATPGP4, PGP4,... subfamily ABCB transporter 0.03 OrthoFinder output from all 47 species
Zm00001e041087_P002 Zm00001e041087 subfamily ABCB transporter 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0000303 response to superoxide RCA Interproscan
CC GO:0005634 nucleus ISM Interproscan
CC GO:0005886 plasma membrane IDA Interproscan
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport RCA Interproscan
BP GO:0007165 signal transduction RCA Interproscan
MF GO:0008559 ABC-type xenobiotic transporter activity IDA Interproscan
BP GO:0009407 toxin catabolic process RCA Interproscan
BP GO:0009414 response to water deprivation RCA Interproscan
CC GO:0009506 plasmodesma IDA Interproscan
BP GO:0009630 gravitropism IMP Interproscan
BP GO:0009651 response to salt stress RCA Interproscan
BP GO:0009723 response to ethylene RCA Interproscan
BP GO:0009733 response to auxin IEP Interproscan
BP GO:0009733 response to auxin RCA Interproscan
BP GO:0009735 response to cytokinin IEP Interproscan
BP GO:0009735 response to cytokinin RCA Interproscan
BP GO:0009737 response to abscisic acid RCA Interproscan
BP GO:0009738 abscisic acid-activated signaling pathway RCA Interproscan
BP GO:0009743 response to carbohydrate RCA Interproscan
BP GO:0009753 response to jasmonic acid RCA Interproscan
BP GO:0009873 ethylene-activated signaling pathway RCA Interproscan
BP GO:0009926 auxin polar transport TAS Interproscan
BP GO:0010315 auxin export across the plasma membrane IDA Interproscan
BP GO:0010315 auxin export across the plasma membrane IMP Interproscan
MF GO:0010328 auxin influx transmembrane transporter activity IDA Interproscan
MF GO:0010329 auxin efflux transmembrane transporter activity IDA Interproscan
BP GO:0010540 basipetal auxin transport IMP Interproscan
BP GO:0010583 response to cyclopentenone RCA Interproscan
CC GO:0016020 membrane IDA Interproscan
BP GO:0042538 hyperosmotic salinity response RCA Interproscan
MF GO:0042626 ATPase-coupled transmembrane transporter activity ISS Interproscan
BP GO:0043090 amino acid import RCA Interproscan
BP GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process RCA Interproscan
BP GO:0043248 proteasome assembly RCA Interproscan
BP GO:0048767 root hair elongation IMP Interproscan
BP GO:0048767 root hair elongation RCA Interproscan
BP GO:0051788 response to misfolded protein RCA Interproscan
BP GO:0060919 auxin import into cell IDA Interproscan
Type GO Term Name Evidence Source
MF GO:0004364 glutathione transferase activity IEP HCCA
BP GO:0009819 drought recovery IEP HCCA
BP GO:0010150 leaf senescence IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
BP GO:0090693 plant organ senescence IEP HCCA
BP GO:2000377 regulation of reactive oxygen species metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 404 551
IPR011527 ABC1_TM_dom 63 335
IPR011527 ABC1_TM_dom 720 993
IPR003439 ABC_transporter-like_ATP-bd 1061 1210
No external refs found!