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AT2G46980


Description : unknown protein; Has 1165 Blast hits to 947 proteins in 158 species: Archae - 0; Bacteria - 33; Metazoa - 631; Fungi - 90; Plants - 54; Viruses - 14; Other Eukaryotes - 343 (source: NCBI BLink).


Gene families : OG0008697 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008697_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G46980
Cluster HCCA: Cluster_127

Target Alias Description ECC score Gene Family Method Actions
LOC_Os10g26560.1 LOC_Os10g26560 ASY3 meiotic recombination chromosome axis protein 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
CC GO:0005694 chromosome IDA Interproscan
CC GO:0005730 nucleolus IDA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000059 obsolete protein import into nucleus, docking IEP HCCA
BP GO:0000741 karyogamy IEP HCCA
CC GO:0000811 GINS complex IEP HCCA
CC GO:0005643 nuclear pore IEP HCCA
BP GO:0006997 nucleus organization IEP HCCA
BP GO:0007275 multicellular organism development IEP HCCA
MF GO:0008565 obsolete protein transporter activity IEP HCCA
BP GO:0009553 embryo sac development IEP HCCA
BP GO:0009560 embryo sac egg cell differentiation IEP HCCA
BP GO:0009846 pollen germination IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
CC GO:0031261 DNA replication preinitiation complex IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
BP GO:0048284 organelle fusion IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!