AT2G46790 (APRR9, TL1, PRR9)

Aliases : APRR9, TL1, PRR9

Description : pseudo-response regulator 9

Gene families : OG0001140 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001140_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT2G46790

Target	Alias	Description	ECC score	Gene Family Method
Aev_g07945	APRR7, PRR7	circadian clock time-of-day-dependent expressed...	0.03	OrthoFinder output from all 47 species
Aob_g33627	APRR7, PRR7	circadian clock time-of-day-dependent expressed...	0.02	OrthoFinder output from all 47 species
Aspi01Gene40465.t2	PRR3, APRR3,...	circadian clock time-of-day-dependent expressed...	0.02	OrthoFinder output from all 47 species
Ceric.04G094100.1	APRR7, PRR7,...	circadian clock time-of-day-dependent expressed...	0.04	OrthoFinder output from all 47 species
Ore_g13226	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Smo16699	APRR7, PRR7	Two-component response regulator-like APRR7...	0.03	OrthoFinder output from all 47 species
Solyc10g005030.4.1	APRR5, PRR5,...	PRR circadian clock time-of-day-dependent expressed repressor	0.24	OrthoFinder output from all 47 species
Zm00001e035953_P001	APRR7, PRR7,...	PRR circadian clock time-of-day-dependent expressed repressor	0.06	OrthoFinder output from all 47 species
Zm00001e038444_P001	APRR7, PRR7,...	PRR circadian clock time-of-day-dependent expressed repressor	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000156	phosphorelay response regulator activity	ISS	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IPI	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IPI	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	TAS	Interproscan
BP	GO:0007165	signal transduction	None	Extended
BP	GO:0007623	circadian rhythm	IMP	Interproscan
BP	GO:0007623	circadian rhythm	TAS	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009266	response to temperature stimulus	IGI	Interproscan
BP	GO:0009314	response to radiation	None	Extended
BP	GO:0009416	response to light stimulus	None	Extended
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009639	response to red or far red light	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009890	negative regulation of biosynthetic process	None	Extended
BP	GO:0009892	negative regulation of metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010017	red or far-red light signaling pathway	IMP	Interproscan
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010558	negative regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010605	negative regulation of macromolecule metabolic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031324	negative regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0031327	negative regulation of cellular biosynthetic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0045892	negative regulation of DNA-templated transcription	IDA	Interproscan
BP	GO:0045934	negative regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0048511	rhythmic process	None	Extended
BP	GO:0048519	negative regulation of biological process	None	Extended
BP	GO:0048523	negative regulation of cellular process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051172	negative regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0051253	negative regulation of RNA metabolic process	None	Extended
BP	GO:0051716	cellular response to stimulus	None	Extended
MF	GO:0060089	molecular transducer activity	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0071214	cellular response to abiotic stimulus	None	Extended
BP	GO:0071478	cellular response to radiation	None	Extended
BP	GO:0071482	cellular response to light stimulus	None	Extended
BP	GO:0071489	cellular response to red or far red light	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
BP	GO:0104004	cellular response to environmental stimulus	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1902679	negative regulation of RNA biosynthetic process	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:1903507	negative regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0006066	alcohol metabolic process	IEP	HCCA
BP	GO:0006970	response to osmotic stress	IEP	HCCA
BP	GO:0006972	hyperosmotic response	IEP	HCCA
BP	GO:0009651	response to salt stress	IEP	HCCA
BP	GO:0009719	response to endogenous stimulus	IEP	HCCA
BP	GO:0009725	response to hormone	IEP	HCCA
BP	GO:0009737	response to abscisic acid	IEP	HCCA
BP	GO:0010033	response to organic substance	IEP	HCCA
BP	GO:0010264	myo-inositol hexakisphosphate biosynthetic process	IEP	HCCA
BP	GO:0019751	polyol metabolic process	IEP	HCCA
BP	GO:0032958	inositol phosphate biosynthetic process	IEP	HCCA
BP	GO:0033517	myo-inositol hexakisphosphate metabolic process	IEP	HCCA
BP	GO:0033993	response to lipid	IEP	HCCA
BP	GO:0042538	hyperosmotic salinity response	IEP	HCCA
BP	GO:0043647	inositol phosphate metabolic process	IEP	HCCA
BP	GO:0046165	alcohol biosynthetic process	IEP	HCCA
BP	GO:0046173	polyol biosynthetic process	IEP	HCCA
BP	GO:0097305	response to alcohol	IEP	HCCA
BP	GO:1901700	response to oxygen-containing compound	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001789	Sig_transdc_resp-reg_receiver	39	150
IPR010402	CCT_domain	417	458

External Links

No external refs found!

AT2G46790 (APRR9, TL1, PRR9)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation