AT2G45640 (ATSAP18, SAP18)

Aliases : ATSAP18, SAP18

Description : SIN3 associated polypeptide P18

Gene families : OG0004148 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004148_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT2G45640

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00001p00193310	ATSAP18, SAP18,...	Chromatin organisation.histone modifications.histone...	0.07	OrthoFinder output from all 47 species
Aob_g03872	ATSAP18, SAP18	associated component *(SAP18) of histone deacetylase...	0.03	OrthoFinder output from all 47 species
Aop_g13183	ATSAP18, SAP18	associated component *(SAP18) of histone deacetylase...	0.02	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00000663.51	ATSAP18, SAP18	Chromatin organisation.histone modifications.histone...	0.02	OrthoFinder output from all 47 species
LOC_Os02g02960.4	ATSAP18, SAP18,...	associated component SAP18 of histone deacetylase machineries	0.03	OrthoFinder output from all 47 species
Len_g03099	ATSAP18, SAP18	associated component *(SAP18) of histone deacetylase...	0.03	OrthoFinder output from all 47 species
MA_83939g0010	ATSAP18, SAP18	associated component SAP18 of histone deacetylase machineries	0.03	OrthoFinder output from all 47 species
Ppi_g58058	ATSAP18, SAP18	associated component *(SAP18) of histone deacetylase...	0.03	OrthoFinder output from all 47 species
Solyc05g047690.3.1	ATSAP18, SAP18,...	associated component SAP18 of histone deacetylase machineries	0.03	OrthoFinder output from all 47 species
Tin_g30788	ATSAP18, SAP18	associated component *(SAP18) of histone deacetylase...	0.03	OrthoFinder output from all 47 species
Zm00001e013500_P001	ATSAP18, SAP18,...	associated component SAP18 of histone deacetylase machineries	0.03	OrthoFinder output from all 47 species
Zm00001e025263_P002	ATSAP18, SAP18,...	associated component SAP18 of histone deacetylase machineries	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IPI	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
CC	GO:0005730	nucleolus	IDA	Interproscan
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006629	lipid metabolic process	None	Extended
BP	GO:0006631	fatty acid metabolic process	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006970	response to osmotic stress	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009062	fatty acid catabolic process	RCA	Interproscan
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009651	response to salt stress	IMP	Interproscan
BP	GO:0009719	response to endogenous stimulus	None	Extended
BP	GO:0009725	response to hormone	None	Extended
BP	GO:0009737	response to abscisic acid	IEP	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0016042	lipid catabolic process	None	Extended
BP	GO:0016054	organic acid catabolic process	None	Extended
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
BP	GO:0032787	monocarboxylic acid metabolic process	None	Extended
BP	GO:0033993	response to lipid	None	Extended
BP	GO:0042221	response to chemical	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044242	cellular lipid catabolic process	None	Extended
BP	GO:0044248	cellular catabolic process	None	Extended
BP	GO:0044255	cellular lipid metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044282	small molecule catabolic process	None	Extended
BP	GO:0046395	carboxylic acid catabolic process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0072329	monocarboxylic acid catabolic process	None	Extended
BP	GO:0097305	response to alcohol	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended
BP	GO:1901700	response to oxygen-containing compound	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000280	nuclear division	IEP	HCCA
CC	GO:0000314	organellar small ribosomal subunit	IEP	HCCA
CC	GO:0005763	mitochondrial small ribosomal subunit	IEP	HCCA
BP	GO:0006354	DNA-templated transcription elongation	IEP	HCCA
BP	GO:0006997	nucleus organization	IEP	HCCA
BP	GO:0007000	nucleolus organization	IEP	HCCA
BP	GO:0009408	response to heat	IEP	HCCA
BP	GO:0009853	photorespiration	IEP	HCCA
BP	GO:0009914	hormone transport	IEP	HCCA
BP	GO:0009926	auxin polar transport	IEP	HCCA
CC	GO:0015935	small ribosomal subunit	IEP	HCCA
BP	GO:0032774	RNA biosynthetic process	IEP	HCCA
BP	GO:0043094	cellular metabolic compound salvage	IEP	HCCA
CC	GO:0044391	ribosomal subunit	IEP	HCCA
BP	GO:0048285	organelle fission	IEP	HCCA
BP	GO:0051726	regulation of cell cycle	IEP	HCCA
BP	GO:0060918	auxin transport	IEP	HCCA
BP	GO:0072593	reactive oxygen species metabolic process	IEP	HCCA
CC	GO:0098798	mitochondrial protein-containing complex	IEP	HCCA
CC	GO:1990904	ribonucleoprotein complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR010516	SAP18	32	151

External Links

No external refs found!

AT2G45640 (ATSAP18, SAP18)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation